DY260370

Overview
NameDY260370
Unique NameDY260370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1153
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.502e-60
Identity = 116/220 (52.73%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  K   GWAARD SGVLSP+ ++ R TG +DV  KV +CG+CH+DLH +KN+ G + YP+VPGHE+VG V EVG  VSKFKVGD VGVG +VGSCR+C  C  D+E YC K I      Y DG  T GG++ +MV D+ FVV+IPEG   +  APLLCAGITVYSPL  +G  + G+               K AKAMG  VTVI +S  K+ EA+  L
Sbjct:    5 EVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.281e-60
Identity = 113/220 (51.36%), Postives = 147/220 (66.82%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ ++ R TG +DV  +V  CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS+V+KF+ GD VGVGC+VGSC +C  C  D+E YC K I +Y   Y DG  T GG++  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL + G+               K AKAMG  VTVI +S  K++EA++ L
Sbjct:    5 EVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 9.509e-60
Identity = 112/217 (51.61%), Postives = 141/217 (64.98%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAV 732
            E  +   GWAARD SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP+VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y   Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+               K AKAMG  VTVI +S  K+ EA+
Sbjct:    5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.793e-58
Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 1
Query:   94 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            N   WAARD SG+LSP+ F+RR    +DV+ ++THCG+C++D+   +N + ++IYP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SC+ C++C   LEN+C K ++TY S   DGT+T GGYS  ++  + +  +IP   PL   APLLCAGITVY+P+  + +++PG                KF KA G+KVTV  TS SK+ EA+NLL
Sbjct:    9 NCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.793e-58
Identity = 114/221 (51.58%), Postives = 145/221 (65.61%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHK-PGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ ++ R TG +DV  K+ +CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS V+KFKVGD VG G +VG C++C  C  D+E YC K I +Y   Y DG  T GG+S  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL +  G+               K AKAMG  VTVI +S  KK EA++ L
Sbjct:    5 EAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHL 225          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.342e-58
Identity = 112/220 (50.91%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+               K AKAMG  VTVI +S  K++EA+  L
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 3.059e-58
Identity = 111/220 (50.45%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CG+CHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+               K AKAMG  VTVI +S  K++EA+  L
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.995e-58
Identity = 109/217 (50.23%), Postives = 142/217 (65.44%), Query Frame = 1
Query:   91 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            +   GWAARD +G LSP+ ++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ TMV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVI +S  K++EA++ L
Sbjct:    8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 5.218e-58
Identity = 109/220 (49.55%), Postives = 146/220 (66.36%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAA D++G L+P+ +S R TG +DV  KV  CG+CH+D+H IKN+ G + YP+VPGHE+VG V EVGS V++FKVGD VGVG +VGSC++C  C  ++E YC K I +Y   Y DG  T GG++++MV  + FVVRIP+G   +  APLLCAG+TVYSPL+ +GL + G+               K AKAMG  VTVI +S  K+ EA+  L
Sbjct:    5 ETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 6.814e-58
Identity = 112/225 (49.78%), Postives = 144/225 (64.00%), Query Frame = 1
Query:   61 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVN 735
            MG     E  K   GWAARD +G LSP+ ++ R TG +DV  KV +CGICH+DLH  KN  G + YP+VPGHE+VG V EVG +VSK+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ +MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVI +S  K++EA++
Sbjct:    1 MGSVDASE--KTITGWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMD 223          
The following BLAST results are available for this feature:
BLAST of DY260370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CADH1_TOBAC2.502e-6052.73Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA7.281e-6051.36Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH5_ARATH9.509e-6051.61Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH4_ORYSJ1.793e-5849.07Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH1_ARACO1.793e-5851.58Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_EUCGL2.342e-5850.91Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.059e-5850.45Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_MAIZE3.995e-5850.23Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_POPDE5.218e-5849.55Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_LOLPR6.814e-5849.78Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YE14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260370 ID=DY260370; Name=DY260370; organism=Citrus clementina; type=EST; length=1153bp
CAAATACCCTGGACGTCAAACTAAGCCAACAAGCACCAATATCATTAAAT
TCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCT
TTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTC
TCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTCACTG
TGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGGGCAATG
CCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAG
GTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGG
ATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTG
AGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGAT
GGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCA
CTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTC
TCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTC
CACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCCAGGCCA
TGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACCGTGATCC
GTACCTCCCCCAGCAAGAAGAGTGAAGCCGTGAACCTCTTGGCGCTGATC
CCTTTTGGTCAGCCGTGATCCAAATGAAAGCCAGCCGCCTGGGCCCAAGG
GAGGGTATCACCAAACCCTACCCTGCATTCCCCCCCTAATGCCTTGATTG
GACCGTTGAATCCCCAAGGAAAGCTTGTACTCCTGGGCCCCCCAAAACCC
CCTAAGCCCCCTCTTCCCCCTGCCCCCGGGGAAGGAAAAAATTGCGGGGC
CTCCCTTGGGGGGCGTGAAAGGAACTCCGCCACTTTTGATTTGCAACCAA
AACCCACCCTCAGCTTTAAACTGAGGTCCCCCTCCCCCCCCATATGGTAA
ACACTCTCACGCACCCTCACTACCAAACCCACAGTATCTATTCCCTTCTC
CCCCCCCCCCCCCCAAACCCAGTCGGTCCCACCCCCGGCAACCTTTCCCC
CCC
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