DY260370

Overview
NameDY260370
Unique NameDY260370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1153
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 8.900e-58
Identity = 111/220 (50.45%), Postives = 142/220 (64.55%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVY PL  +GL + G+               K AKAMG  VTVI +S  K++EA+  L
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.162e-57
Identity = 107/214 (50.00%), Postives = 144/214 (67.29%), Query Frame = 1
Query:   91 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAV 732
            +   G AA+D SG+L+P+ ++ R TG  DV  K+ +CG+CHSDLH IKN+ G + YP+VPGHE+VG V EVGS V++FKVG+ VGVG +VG C+SC +C  ++E YC K I +Y   Y DG IT GG++++ V ++ FVV+IPEG   +  APLLCAG+TVYSPL  +GL  PG+               K AKA+G  VTVI +S  KK EA+
Sbjct:    9 RTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEAL 222          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.589e-57
Identity = 107/217 (49.31%), Postives = 143/217 (65.90%), Query Frame = 1
Query:   91 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            +   GWAARD +G L+P+ ++ R+TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ TMV D+ FV++IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVI +S  K++EA++ L
Sbjct:    8 RKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHL 224          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 7.534e-57
Identity = 106/215 (49.30%), Postives = 139/215 (64.65%), Query Frame = 1
Query:   91 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVN 735
            K   GWAARD SG L+P++++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+  GD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVI +S  K+ EA++
Sbjct:    8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMD 222          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 3.165e-55
Identity = 109/220 (49.55%), Postives = 142/220 (64.55%), Query Frame = 1
Query:   82 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  + FVV+IP+G   +  A ++CAG+TVYSPL  +GL + G+               K AKAMG  VTVI +S  K++EA+  L
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 223          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.963e-53
Identity = 101/212 (47.64%), Postives = 136/212 (64.15%), Query Frame = 1
Query:  106 WAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNLL 741
            WAARD SG+LSP   +RR+    DV+  +THCG+C++D+   +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD VGVG  V SCR C+ C    E  C K + T+    HDG++T GGYS  +V  E +  +IP   PL++ APLLCAGITVY+P+  + +++PG                KF KA G+ VTV  TS SKK EA+NLL
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLL 225          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.144e-47
Identity = 98/212 (46.23%), Postives = 124/212 (58.49%), Query Frame = 1
Query:  106 WAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC-PKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNL 738
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SCR C+SC   +E YC P    TY S   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+  S  K  + + L
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNA-GANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRL 217          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.144e-47
Identity = 98/212 (46.23%), Postives = 124/212 (58.49%), Query Frame = 1
Query:  106 WAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC-PKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNL 738
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SCR C+SC   +E YC P    TY S   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+  S  K  + + L
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNA-GANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRL 217          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.581e-46
Identity = 95/196 (48.47%), Postives = 120/196 (61.22%), Query Frame = 1
Query:  154 RRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEAVNL 738
            RR     DV   +   GICHSD+H   +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+VGVGC V SC  C+ C    E +C K V+ TY S  +DG  TYGGYS  +V  + FVVRIP+   +D  +PLLCAGIT YSPL+ + +  PG                +FA AMG +VTV+  S +KK EA+ L
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV-GPGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALEL 220          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.992e-41
Identity = 91/201 (45.27%), Postives = 112/201 (55.72%), Query Frame = 1
Query:  133 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGT-ITYGGYSDTMVADEHFVVRIPE-GAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVIRTSPSKKSEA 729
            L P   +RR  G  DV  ++ +CG+CHSDLH +++EW   +YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY S   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +    PG                K A AMG  V    TS +K+  A
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA 214          
The following BLAST results are available for this feature:
BLAST of DY260370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CADH1_EUCGU8.900e-5850.45Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_MEDSA1.162e-5750.00Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_SACOF2.589e-5749.31Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH2_ORYSJ7.534e-5749.30Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_EUCBO3.165e-5549.55Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH2.963e-5347.64Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU4.144e-4746.23NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO4.144e-4746.23NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU4.581e-4648.47Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI1.992e-4145.27Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YE14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260370 ID=DY260370; Name=DY260370; organism=Citrus clementina; type=EST; length=1153bp
CAAATACCCTGGACGTCAAACTAAGCCAACAAGCACCAATATCATTAAAT
TCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCT
TTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTC
TCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTCACTG
TGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGGGCAATG
CCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAG
GTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGG
ATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTG
AGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGAT
GGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCA
CTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTC
TCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTC
CACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCCAGGCCA
TGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACCGTGATCC
GTACCTCCCCCAGCAAGAAGAGTGAAGCCGTGAACCTCTTGGCGCTGATC
CCTTTTGGTCAGCCGTGATCCAAATGAAAGCCAGCCGCCTGGGCCCAAGG
GAGGGTATCACCAAACCCTACCCTGCATTCCCCCCCTAATGCCTTGATTG
GACCGTTGAATCCCCAAGGAAAGCTTGTACTCCTGGGCCCCCCAAAACCC
CCTAAGCCCCCTCTTCCCCCTGCCCCCGGGGAAGGAAAAAATTGCGGGGC
CTCCCTTGGGGGGCGTGAAAGGAACTCCGCCACTTTTGATTTGCAACCAA
AACCCACCCTCAGCTTTAAACTGAGGTCCCCCTCCCCCCCCATATGGTAA
ACACTCTCACGCACCCTCACTACCAAACCCACAGTATCTATTCCCTTCTC
CCCCCCCCCCCCCCAAACCCAGTCGGTCCCACCCCCGGCAACCTTTCCCC
CCC
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