DY260370

Overview
NameDY260370
Unique NameDY260370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1153
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 5.278e-18
Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1
Query:  166 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPG----HEIVGVVTEVGS--KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 588
            G+ +V   +TH G+CHSD  ++ N W    +P  PG    HE VG V ++G+  + S  K+GD+VGV  +  +C  C  C    +  C        ++   G  T G +   ++    +V  IP+G P    APLLCAG+TVY+ L+
Sbjct:   34 GDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLC-------FNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK 173          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.469e-17
Identity = 48/178 (26.97%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  169 EKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAKAMGVKVTVI 699
            E ++  K+ + GICHSDLH  + ++  A I P++ GHE  G V  +GSKV  + +GD+ G+  +  +C +C+ C    E  C  +        + G   +G + + +   +   +++     L A AP+LC G+T Y  L+   +    +               ++AKAMG++V  +
Sbjct:   34 ENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI-------QNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKAMGMRVVAV 204          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAC (Alcohol dehydrogenase OS=Staphylococcus aureus (strain COL) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAAB (Alcohol dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
BLAST of DY260370 vs. ExPASy Swiss-Prot
Match: ADH_STAA8 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=adh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.783e-16
Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  157 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLHKPGMHXXXXXXXXXXXXXXKFAK-AMGVKVTVIRTSPSKKSEAVNL 738
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A  L
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKEL 205          
The following BLAST results are available for this feature:
BLAST of DY260370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ADH2_EMENI5.278e-1834.01Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH2_CAEEL4.469e-1726.97Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
ADH_STAAW3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAC3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAB3.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA83.783e-1626.67Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YE14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260370 ID=DY260370; Name=DY260370; organism=Citrus clementina; type=EST; length=1153bp
CAAATACCCTGGACGTCAAACTAAGCCAACAAGCACCAATATCATTAAAT
TCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCT
TTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTC
TCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTCACTG
TGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGGGCAATG
CCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAG
GTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGG
ATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTG
AGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGAT
GGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCA
CTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTC
TCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTC
CACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCCAGGCCA
TGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACCGTGATCC
GTACCTCCCCCAGCAAGAAGAGTGAAGCCGTGAACCTCTTGGCGCTGATC
CCTTTTGGTCAGCCGTGATCCAAATGAAAGCCAGCCGCCTGGGCCCAAGG
GAGGGTATCACCAAACCCTACCCTGCATTCCCCCCCTAATGCCTTGATTG
GACCGTTGAATCCCCAAGGAAAGCTTGTACTCCTGGGCCCCCCAAAACCC
CCTAAGCCCCCTCTTCCCCCTGCCCCCGGGGAAGGAAAAAATTGCGGGGC
CTCCCTTGGGGGGCGTGAAAGGAACTCCGCCACTTTTGATTTGCAACCAA
AACCCACCCTCAGCTTTAAACTGAGGTCCCCCTCCCCCCCCATATGGTAA
ACACTCTCACGCACCCTCACTACCAAACCCACAGTATCTATTCCCTTCTC
CCCCCCCCCCCCCCAAACCCAGTCGGTCCCACCCCCGGCAACCTTTCCCC
CCC
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