DY260375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METKA (30S ribosomal protein S3Ae OS=Methanopyrus kandleri GN=rps3Ae PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.518e-18 Identity = 61/198 (30.81%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIA----EMIGKEIEKATSSIYPLQNVFLRKVKTLKAPN 726 WY I AP F VG+T E + RV E +LGD+L++ + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D + +R+ + FT R A+TSQ R I ++M +++ A CD + + ++ E I ++I++A IYP++ +RK + L+ PN Sbjct: 11 WYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHHIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTR---------RAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEPN 192
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRFU (30S ribosomal protein S3Ae OS=Pyrococcus furiosus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17 Identity = 62/193 (32.12%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY I AP F VG T E + +RV EV+L D+ + ++ K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R I + M+EI+ +A + K V + + I EI K IYPL+ +RK+K L+ P Sbjct: 18 WYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEP 194
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_ARCFU (30S ribosomal protein S3Ae OS=Archaeoglobus fulgidus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.857e-17 Identity = 59/195 (30.26%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 W+ + AP F + +G+T +K+ R E +L +L N+ ++ Y+K+ + V G N T FW T + L SL R+ + IE VDV T D + LR+ + FT R +TSQ R I MR+I+V +A+S + +++ + + EI K IYP++ V +RK++ L P Sbjct: 19 WFTLIAPEYFGMAELGET--PADDASKVVG-----RTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVR---------RCKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRHO (30S ribosomal protein S3Ae OS=Pyrococcus horikoshii GN=rps3Ae PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.873e-17 Identity = 62/193 (32.12%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R I + M+EI+ +A + K V + + I EI K IYPL+ +RK+K L P Sbjct: 20 WYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIKVLGEP 196
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAB (30S ribosomal protein S3Ae OS=Pyrococcus abyssi GN=rps3Ae PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.418e-16 Identity = 62/193 (32.12%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R I + M+EI+ +A + K V + + I EI K IYPL+ +RK+K L P Sbjct: 19 WYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAAR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKVLGEP 195
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METBF (30S ribosomal protein S3Ae OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.159e-16 Identity = 60/198 (30.30%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 +WY+I+AP+ VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A +DVKT D + +R VK TC+ A++SQI+ I M I+ +A+ D ++ +++ I + I + IYPL+ V +RK + AP Sbjct: 17 EWYNIEAPAYLNRAIVGNTMA----GDPSLLVG---RNIETTVGELTNDMTKNNTKVILRINNVVGDVATTDLMGHELTTDYIRSIVKRQTSRIDANIDVKTKDGYIIR-------------VKPTCFTIKRARSSQIKAIREMMVNIVAKRASEADFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAAP 194
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_DESK1 (30S ribosomal protein S3Ae OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.200e-15 Identity = 58/196 (29.59%), Postives = 90/196 (45.92%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFE 732 WY++ AP+ F +G T E L RV E +L D+ + + K+ + + G LT F G D +RSLVR+ + I+ D+ T D + LR+ + T N TSQ + I R MRE + +A+ L LV++ ++ I EI + IYP++ V + K K L P+ E Sbjct: 18 WYEVVAPTSFGGITLGSTPADDP-------EKLIGRVIETTLYDITGDITQVHVKLYFQIISIDGNKALTRFKGHELARDYMRSLVRRKSSKIQGIFDINTKDGYVLRVTIVALTSYRCN---------TSQKKAIRRVMREYIFKKASELTLDELVQEIMSYKISNEIAELARKIYPIRRVEVYKTKLLLIPSPE 197
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METAC (30S ribosomal protein S3Ae OS=Methanosarcina acetivorans GN=rps3Ae PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.568e-15 Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 +WY+I+AP VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A VDVKT D + +R VK TC+ A++SQ++ I M EI+ +AA D ++ +++ I + I + IYPL+ V +RK + P Sbjct: 17 EWYNIEAPVYLNRAIVGNTMA----GDPSLLVG---RNVETTVGELTNDMTKNNTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIR-------------VKPTCFTIKRARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEVETIP 194
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METMA (30S ribosomal protein S3Ae OS=Methanosarcina mazei GN=rps3Ae PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.780e-15 Identity = 59/198 (29.80%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 +WY+I+AP+ VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A VDV+T D F +R VK TC+ A++SQ++ I M +I+ +A+ D ++ +++ I + I + IYPL+ V +RK + P Sbjct: 17 EWYNIEAPAYLNRVIVGTTMA----GDPSLLVG---RNVETTVGELTNDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIR-------------VKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAE (30S ribosomal protein S3Ae OS=Pyrobaculum aerophilum GN=rps3Ae PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14 Identity = 56/193 (29.02%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 W+ + APS +G + + ++ L R EVSL D+ + H K++ + V+G LT F G+ T D +RSLVRK + + A +VKT D +R+ +G T R AQ S +R +KM E +V +AA D +++ + + ++ I P++ V + K+K LK P Sbjct: 27 WFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLPIKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGIT------THRIGTAQKSAMR---KKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203 The following BLAST results are available for this feature:
BLAST of DY260375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260375 ID=DY260375; Name=DY260375; organism=Citrus clementina; type=EST; length=1226bpback to top |