DY260375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_ENTBH (40S ribosomal protein S1 OS=Enterocytozoon bieneusi (strain H348) GN=RPS1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.327e-14 Identity = 56/187 (29.95%), Postives = 96/187 (51.34%), Query Frame = 1 Query: 172 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL-PNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLK 717 F + N G T + + + + L R F V+ GDL + ++ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F TK+ P+ +K YA+ S+I+ I +++ E + +++ LV+ E + KE E + IYP+ + + KVK +K Sbjct: 41 FPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVNSPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFVNAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFETRCNEIYPIFAMII-KVKPIK 224
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_THEON (30S ribosomal protein S3Ae OS=Thermococcus onnurineus (strain NA1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.264e-14 Identity = 55/194 (28.35%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 +WY + AP F + +G T E + RV E +L DL + K+ + DV+G+N T F G + +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R I MR+I+ +A + K + + + + EI K IYP++ +RK+K L P Sbjct: 21 EWYVVYAPDFFGNKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGQVKLYFQIYDVKGQNAYTKFKGHTLSRSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYR---------RIQTSQERAIREIMRDIIYKKAEELNYKDFILEAVTGKMATEIAKEARKIYPIKRAEIRKIKVLAEP 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRIL (30S ribosomal protein S3Ae OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.264e-14 Identity = 54/193 (27.98%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 W+ + APS +G + ++ + L R EVSL D+ + H K+R + V G +T F G+ T D +RSLVRK + + A V+VKT D + +R+ + T R AQ S +R ++M +++ +A+ D+ +++ + ++ ++ A I PL+ V + K+K LK P Sbjct: 27 WFSVYAPSY-----LGGVFLAEVPASE--PQKLLLRTLEVSLFDITKDLSHLPIKLRFQIHKVDGLKAITRFKGLELTRDYIRSLVRKGTSKVSAIVEVKTKDGWVMRIAVLAIT------THRIGSAQKSAMR---KRMFDVLTRKASEMDIGQFLKEVLEGLLTADLFVAGKKIAPLRKVEIAKIKVLKYP 203
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_THESM (30S ribosomal protein S3Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.043e-14 Identity = 54/194 (27.84%), Postives = 86/194 (44.33%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 DWY + AP F +G T E +K R+ E +L D+ + + K+ R DV+G+N T F G +RSLVR+ T I+ +V T D + LR+ + R Q+SQ R + M +++ +A V + + +G E+ + IYPL+ +RK+K L P Sbjct: 21 DWYIVYAPEFFGNVEIGLTPADEP-------EKVKGRIIETTLRDVTGDFTKGHVKLYFRIHDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNVTTKDGYKLRVMGMVIAIR---------RIQSSQERAVREVMEDLIRKKAEELTFTEFVLEAVNGKMGAELAREAKKIYPLKRAEIRKIKVLAEP 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_THEGJ (30S ribosomal protein S3Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.043e-14 Identity = 54/194 (27.84%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 +W+ + AP F + +G T E + RV E +L DL + + K+ + DV+G+N T F G +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R I R +++I+ +A + V + + I EI K IYP++ +RK+K L P Sbjct: 21 EWFVVYAPDFFGSKEIGLTPADEP-------EKVIGRVVETTLKDLTGDFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYR---------RIQTSQERAIRRIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEIRKIKVLAEP 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRKO (30S ribosomal protein S3Ae OS=Pyrococcus kodakaraensis GN=rps3ae PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.043e-14 Identity = 54/195 (27.69%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 142 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPN 726 +WY + AP F + +G T E + RV E +L DL + + K+ + DV+G+N T F G +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R I + +++I+ +A + V + + I EI K IYP++ +RK+K L P+ Sbjct: 21 EWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYR---------RIQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEVRKIKVLAEPS 199
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_THENV (30S ribosomal protein S3Ae OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.586e-14 Identity = 57/193 (29.53%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY + APS +G + + ++ L R EVSL D+ + H K+R + V G T F G+ T D +RSLVRK + + A VDVKT D + +R+ + T R AQ S IR +++ E + +A+ D+ +++ + + E+ A I PL+ V + K+K L+ P Sbjct: 27 WYTVYAPSY-----LGGVALAEVPAAE--AQKLLLRTIEVSLYDITKDISHLPIKLRFQIHRVDGLKAATRFKGLELTRDYVRSLVRKGTSKVSAIVDVKTKDGWVMRISILAVT------AHRIGTAQKSAIR---KRVAEALSRKASDSDVGQFLKEVLEGSLAAELFVAGKKIAPLRKVEVAKIKVLRYP 203
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRCJ (30S ribosomal protein S3Ae OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.123e-13 Identity = 50/164 (30.49%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 232 SEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 ++ L R EV+L D+ + H K+R + V G N T F G+ T D LRSL+R+ + I A DVKT D + +R+ +G T R AQ S IR ++ E++ +AA D+ +++ + + ++ A I P++ V + K+K L+ P Sbjct: 49 AQKLVKRTLEVTLYDITKDISHLPIKLRFQIHRVDGLNASTRFKGLELTRDYLRSLIRRGTSKIMAITDVKTKDGWVMRVAVLGVT------THRVGTAQKSAIR---KRFIEVVTKKAAEADIGQFLKEVLEGTLAADLFIAGKKIAPMRKVEVAKIKVLRYP 203
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METTH (30S ribosomal protein S3Ae OS=Methanobacterium thermoautotrophicum GN=rps3Ae PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.269e-13 Identity = 57/194 (29.38%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQ-IPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY IK+P F +G T ++ LK RV E ++ +L + Y K++ + + V G T F G TTD +RS++R+ + ++A V V+T D + L++ + T ++R +Q +RQ I +REI A+ + LVE + I EI IYPL+ V + K + L+ P Sbjct: 18 WYVIKSPKLFGENEIGTT------PSRDPDFLLKRRV-EATMRELTGDFSKQYVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAIT------IRRAKSSQQKYMRQSIEEHLREI----ASEKTFEELVEGIVTGKIASEIYHQAKKIYPLKRVEIIKSRVLEEP 194
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULTO (30S ribosomal protein S3Ae OS=Sulfolobus tokodaii GN=rps3Ae PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.269e-13 Identity = 57/193 (29.53%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 W+ I AP F G+ ++ T A++ L +V E +L DL + Y + R V+G +LT F G + D +RSLVR+ + I+A DV T D + LR+ + T T A SQ +I + + I+ +A+ V+ + + +I + IYPL+ V + K K LKAP Sbjct: 16 WFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVYVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALT---------TYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRKVEVEKTKLLKAP 192 The following BLAST results are available for this feature:
BLAST of DY260375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260375 ID=DY260375; Name=DY260375; organism=Citrus clementina; type=EST; length=1226bpback to top |