DY260375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_METB6 (30S ribosomal protein S3Ae OS=Methanoregula boonei (strain 6A8) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.576e-13 Identity = 58/196 (29.59%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 157 KAPSCFRVR---NVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF--CIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFL--RKVKTLKAP 723 KA S F+V N+GK + T +++ E +K R+ + +LG++ N+ + K+ + +V G T F G T D LRSLV++ + I+ +V V T DN +RL C F + A +Q + + +VAQA + DL +LV ++ I K++ K ++YP + V + KV+ + AP Sbjct: 15 KAKSWFKVYTPDNLGKAYIGDTIASEV--ETVKGRIMQATLGEITNDYAKQHIKMSFKIAEVTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRLTISCYTFAR-----------ANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKVEQVAAP 197
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_HALMA (30S ribosomal protein S3Ae OS=Haloarcula marismortui GN=rps3Ae PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.622e-12 Identity = 53/192 (27.60%), Postives = 88/192 (45.83%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKA 720 WY ++AP F +GKT + + R E +LG+L N+ K+ + +V + T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T T A SQ + I R M +++ A + L++ + + I IYPL+ V ++K TL+A Sbjct: 15 WYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT---------TKKADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKT-TLEA 189
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAR (30S ribosomal protein S3Ae OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.119e-12 Identity = 53/193 (27.46%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 W+ + AP +G + T+ +E L R EVSL D+ + H K++ + V+G LT F G+ + D ++SLVRK + + A +VKT D +R+ + T R AQ S +R +K+ E ++ +A+ D +++ + + ++ A I PL+ V K+K LK P Sbjct: 27 WFAVHAPPY-----LGGVFLAEVPATE--AEKLLMRTLEVSLYDITKDISHLPVKLKFQIHRVEGLRALTRFKGLELSRDYVKSLVRKGTSKVVAITEVKTKDGMDMRVSVMVIT------AHRLGTAQKSAVR---KKITETLLKKASEMDTSQFLKEVLEGTLAADLFIAAKKIAPLRKVEFAKIKVLKYP 203
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIY (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIN (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIM (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIL (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIK (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULIA (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.27) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.614e-12 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAPNFESLEN*GK 753 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ I + + E + +A+ ++ + + EI +AT IYPL+ + K K LK P EN GK Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVP-----ENLGK 198
BLAST of DY260375 vs. ExPASy Swiss-Prot
Match: RS3A_SULAC (30S ribosomal protein S3Ae OS=Sulfolobus acidocaldarius GN=rps3ae PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.165e-12 Identity = 62/197 (31.47%), Postives = 91/197 (46.19%), Query Frame = 1 Query: 145 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIPRKMREIMVAQAASCDLKSLVEKFIAEMIGKEIEKATSSIYPLQNVFLRKVKTLKAP 723 WY I AP F G+ L+ T I ++ L ++ EV+L DL + H Y KI ++ G + T F+G + D +RSLVR+ + I A VDV T D + LR+ + T T A SQ I + + +I +A D V+ I + +I + IYPL+ V + K K LKAP Sbjct: 18 WYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVYIHLYFKI---LGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLT---------TYRAHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAP 195 The following BLAST results are available for this feature:
BLAST of DY260375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260375 ID=DY260375; Name=DY260375; organism=Citrus clementina; type=EST; length=1226bpback to top |