DY260387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.035e-30 Identity = 60/103 (58.25%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 249 EQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRY-----SPSASSLIETPVA 542 E FPERPG+PECQ+++KTGDCKFG+ C+FHHPRDR P +C LS +GLPLRPG C FY + G CKFG +CKFDHPM Y SPS SS + A Sbjct: 237 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETA 339 HSP 2 Score: 103.99 bits (258), Expect = 1.956e-21 Identity = 45/101 (44.55%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 243 QMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP-------MGAMRYSPSASSL 524 +++ +PER G+PEC+++LKTG CKFG +C+FHHPR++ + +++ L PLRP C+++L+ G+CKFG TCKF+HP M ++R SP S+L Sbjct: 79 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSAL 179 HSP 3 Score: 94.7449 bits (234), Expect = 1.187e-18 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 246 MEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSAS-SLIETPVAP 545 ++ S+PER GEP+C Y+++TG C+FGS+CRF+HP DR + + P R G C FYL+ G CKFG TCKF HP S S +++ P+ P Sbjct: 35 VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRP 134
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.355e-22 Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 252 QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETP 536 + FPERP +PEC Y++KTGDCKF +C++HHP++R+ AL+ GLPLRP CT+Y + G CKFG C+FDH + + S+ +++E P Sbjct: 341 EEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 435 HSP 2 Score: 86.6557 bits (213), Expect = 3.232e-16 Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 3 Query: 243 QMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDR--------------------------------------------VVPRTNCALSP----LGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 + E +P RPG +C ++++TG CKFGSSC+F+HP R +P++ A +P LGLPLRPG C +Y++NG CK+GA CKF+HP Sbjct: 102 ESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.018e-22 Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 51 SPGVVP-FSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAXXXXXXXXXXXXXXXXQME-QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIE 530 S GV P S WN Y AS + P P A S Y Q+++S+ + QM + FPERP +PEC Y+LKTGDCKF C++HHP++R+ + + + GLPLRP CT Y + G CKFG C+FDH + +SPS+S +E Sbjct: 276 SRGVTPQASDWNGYQASSA--YPPERSPL--APSSY---QVNNSLAETSSFSQYQH---------QMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSI-PPTFSPSSSQTVE 420 HSP 2 Score: 94.7449 bits (234), Expect = 1.187e-18 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 264 ERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPV 539 E P EC+Y+ +TG CK+G SCRF H ++ P + L+ LGLP+RPG + C FY++NG CKFG+ CKF+HP P+A +++P+ Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHP------DPTAIGGVDSPL 232
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 6.724e-22 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 255 SFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRT-------NCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 ++P+RPG+ EC Y++KTG+CKFG C+FHHP DR+ T N LS G P R GA C +Y++ G CK+GATCKFDHP Sbjct: 416 TYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499 HSP 2 Score: 95.9005 bits (237), Expect = 5.328e-19 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 252 QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 + +PERPGEP+C Y++KT CK+GS C+F+HPR+ S LP RP CTFY++ G+CKFG +CKF HP Sbjct: 220 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTFYMKTGKCKFGLSCKFHHP 294 HSP 3 Score: 92.0485 bits (227), Expect = 7.693e-18 Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 243 QMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCAL--------------------------SPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 + + S PERP EP C +++KTG CKFG SC+FHHP+D +P ++ + + GLP+R G C FYL+ G CK+GATC+++HP Sbjct: 260 ETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366 HSP 4 Score: 75.485 bits (184), Expect = 7.451e-13 Identity = 40/109 (36.70%), Postives = 54/109 (49.54%), Query Frame = 3 Query: 258 FPERPGEPECQYFLKTGDCKFGSSCRFHHP------------RDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYS-PSASSLIETPVAP 545 +P+R GE +C ++++T CKFG SCRF HP VVP P RPG C +Y++ RCK+G+ CKF+HP S + SL E P P Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEE-------YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEP 272
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.434e-21 Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 252 QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYP 551 + +PERPG+PECQ+F+K+G CKF C++HHPR V P ALSPLGLP++P CT+Y + G CKFG C ++HP +SP ++ A YP Sbjct: 428 EEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAG--ALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHP---FNFSPVPAAGPPLLPAQYP 522 HSP 2 Score: 73.559 bits (179), Expect = 2.832e-12 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 264 ERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCA---LSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 E + EC+Y+ G CKFG +C++ H RD +T+ L+ LGLPLRPG + C +Y++ G CK+ CKF HP Sbjct: 236 EGSSQEECKYYSTPGGCKFGKACKYLH-RDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.825e-20 Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 249 EQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 ++ PER G+P+C+YFLKTG CK+G +C++HHP+DR + + +GLP+R G +PC +YL+ G C+FG CKF HP Sbjct: 84 KEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHP 161 HSP 2 Score: 93.9745 bits (232), Expect = 2.025e-18 Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = 3 Query: 21 VQGAYGPVLFSP--GVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAXXXXXXXXXXXXXXXXQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPM 488 V +Y P+L SP G +P GW PY A+ + + + QP +S +S A+A + + E +PEC++F+ TG CK+G C++ HP R+ ++P LP RPG C + G CKFG CKFDHPM Sbjct: 201 VPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSS-------ASMAMAVA-----------------LNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334 HSP 3 Score: 82.0333 bits (201), Expect = 7.961e-15 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 258 FPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPV 539 +P+RPGE +CQ++L+TG C +GSSCR++HP +P+ + A LP R G C ++L+ G CK+G TCK+ HP P ++I P+ Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTH--LPQ-DVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPM 134
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.690e-20 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 249 EQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDH 482 E+ FPERPGEPEC Y+L+TG+C +C++HHP++ C L+ GLPLRPG C Y + G C+ G TCKFDH Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.123e-19 Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 3 Query: 252 QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVP---------RTNC------------ALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 + FP RPGEP+C Y++K G CKFG +CRF+HP VP +C L+ LGLPLRPG C++Y+ G CKFG CKFDHP Sbjct: 85 EQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183 HSP 2 Score: 86.6557 bits (213), Expect = 3.232e-16 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 243 QMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 ++E+ P RPGEP+C Y++K G CKFG SC ++HP R + P RPG C++Y++ G CKFG C+F+HP Sbjct: 36 KVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H26_ARATH (Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.088e-19 Identity = 55/176 (31.25%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 30 AYGPVLFSP--GVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAXXXXXXXXXXXXXXXXQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYP 551 AY P + +P G++P GW Y + +P+ + Q +++ VT S SF ER EC++F+ TG CK+G C++ HP++R++ L+P+ LP RPG C + G CKFGA CKFDH M Y+ + ++ P PYP Sbjct: 207 AYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDSSSSASVAVTVTSH------------------------HHSFSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLP-TPYP 354 HSP 2 Score: 88.5817 bits (218), Expect = 8.506e-17 Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 3 Query: 246 MEQS--FPERPGEPECQYFLKTGDCKFGSSCRFHHP-----------RDRVVPRTN--------CALSP--------------------LGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 MEQS +P+RPGE +CQ+FL+TG C +G+SCR++HP RD++ R C P LGLP+R G +PC +Y+Q G C+FG CKF HP Sbjct: 35 MEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDCETGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155
BLAST of DY260387 vs. ExPASy Swiss-Prot
Match: C3H8_ORYSJ (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 3.453e-18 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 246 MEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRV----VPRTN----CALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 +E+S+PE+ GEP+C +F+KTG CKFGS C+F+HP+++V TN A S + LP+RP C+FY + G+CKF A CKF+HP Sbjct: 149 VEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSI-LPVRPSEPLCSFYAKTGKCKFRAMCKFNHP 235 HSP 2 Score: 89.3521 bits (220), Expect = 4.987e-17 Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 3 Query: 255 SFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSP---------LGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 ++P+RPG C +++KTG CKF C+FHHP DR P + P GLP R A C FY++ G CKFG CKFDHP Sbjct: 363 TYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 448 HSP 3 Score: 76.6406 bits (187), Expect = 3.345e-13 Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 258 FPERPGEPECQYFLKTGDCKFGSSCRFHHPR---DRVVP--RTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 485 +P+RPGE +C +++ T CKFG SC+F HP+ + +P + A P + G C F+++ G+CKFG+ CKF+HP Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182 The following BLAST results are available for this feature:
BLAST of DY260387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260387 ID=DY260387; Name=DY260387; organism=Citrus clementina; type=EST; length=1254bpback to top |