DY260402

Overview
NameDY260402
Unique NameDY260402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1147
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260402 vs. ExPASy Swiss-Prot
Match: HYES_CORS2 (Soluble epoxide hydrolase OS=Corynebacterium sp. (strain C12) PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 3.514e-14
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 1 
Query:   52 KIEHTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKAL 408
            +I H     NG  MH  + G+G  ++ +HG+P+ WY WRN +  L+ + +  IAPDLRG GD++ P  +T +                   +V ++GHDWG  +A+YF     D V+ L
Sbjct:    4 EITHHQAMINGYRMHYVTAGSGYPLVLLHGWPQSWYEWRNVIPALAEQ-FTVIAPDLRGLGDSEKP--MTGFDKRTMATDVRELVSHLGYDKVGVIGHDWGGSVAFYFAYDNRDLVERL 119
The following BLAST results are available for this feature:
BLAST of DY260402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HYES_CORS23.514e-1433.61Soluble epoxide hydrolase OS=Corynebacterium sp. (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP12YG04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260402 ID=DY260402; Name=DY260402; organism=Citrus clementina; type=EST; length=1147bp
ACCTTCAGATTTCATAGTTGCACCAAAAGGAAAAACAAACAAACAATGGA
GAAAATAGAGCACACAACAGTAGCCACTAACGGCATAAACATGCACGTGG
CATCAATAGGGACAGGCCCAGCAGTTCTCTTCATTCACGGCTTCCCTGAA
CTCTGGTATTCCTGGCGCAACCAGCTCCTCTATCTCTCTTCCCGCGGCTA
CCGTGCCATTGCCCCAGACCTTCGTGGATACGGCGACACCGACGCCCCAC
CCTCGGTCACGTCGTACACGGCACTCCATCTTGTCGGTGACCTCATCGGC
CTCCTTGATAAATTGGGTATCCATCAAGTTTTCCTAGTGGGTCATGACTG
GGGTGCTTTGATTGCTTGGTATTTTTGTTTGTTTAGGCCGGACAGAGTCA
AGGCCTTAGTCAACATGAGCGTCCCCTTTCCTCCCAGAAACCCGGCTGTG
AGACCTCTTAATAACTTCAGGGCTGTCTATGGTGATGATTATTATATCTG
CAGATTTCAGGAACCTGGAGAGATTGAAGAAGAGTTTGCTCAGATTGATA
CTGCAAGACTTATGAAGAAATTTCTGTGTTTGCGCATTCCAAAACCACTT
TGTATACCCAAAGATACAGGACTCAGTACTCTACCGGATCCTTCAGCGTT
GCCCTCTTGGCTGTCAGAAGAAGATGTCAATTATTATGCCTCCAAATTTA
ACCAGAAAGGCTTCACTGGACCAGTGAATTATTATCGATGTTGGGATCTA
AATTGGGAGCTGATGGCGCCATGGACTGGGGTACAAATCAAAGTACAATC
CAGTATATCCGGGGGTGACCAGGATCTTGTCCATAACAACAAAAGGACAA
AAGGAAAAAACCCCATGGTGGGCTCCAAAAATATGACCATATCCGCCGGA
GTAATTGTCCAGGAAGGGGAACCCCCCTTTACCAACCAAAAAAGGCCAAA
AAATTGGGGCCCACCCCCATAATTTCCCCCAAAATTTCCAAGGGAGCCTT
GGCCTTTTCCCCCCCCCCCCCCGCCCCGCCCCCCCCAAAAAAATTACCAT
CCAAAAATTTCCTTAATTCCCCCCCCACCCACCCCCCCCGGCCCCCCCCC
CCCCCCAAGTATTCTGGGATTTTTTTCCTTTTTCCCCCCCAAAAAAA
back to top