DY260438

Overview
NameDY260438
Unique NameDY260438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1232
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14751 contig Ccv1_Contig14751:472..1703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.245e-28
Identity = 69/177 (38.98%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLAV F++  ++L+ GR F G+G+G+ SYVVP++IAEI P                 G S+ +  G+   WR                     ESPRWLA  G D+E +V+L+KLRG+++DI +EAAEI+  +   R   ++ IRDLF      S+IIG+ LM+LQQF G   I  Y
Sbjct:  106 WLAVAFAHDIIMLNTGRLFLGFGVGLISYVVPVYIAEITPKTFRGGFSYSNQLLQCLGISLMFFTGNFFHWRTLALLSAIPSAFQVICLFFIPESPRWLAMYGQDQELEVSLKKLRGENSDILKEAAEIRETVEISRKESQSGIRDLFHIGNAHSLIIGLGLMLLQQFCGSAAISAY 282          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.245e-28
Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLAV F++  +LL+IGR F G+G+G+ SYVVP++IAEI P                 G S+ +  G+   WR                     ESPRWLA  G ++E +V L++LRG++ DI  EAAEI+  + T R   ++ ++DLF  K    +IIG+ LM+LQQF G   I  Y
Sbjct:  108 WLAVAFAHDKMLLNIGRGFLGFGVGLISYVVPVYIAEITPKAFRGGFSFSNQLLQSFGISLMFFTGNFFHWRTLALLSAIPCGIQMICLFFIPESPRWLAMYGRERELEVTLKRLRGENGDILEEAAEIRETVETSRRESRSGLKDLFNMKNAHPLIIGLGLMLLQQFCGSSAISAY 284          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.054e-27
Identity = 66/177 (37.29%), Postives = 90/177 (50.85%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLA+  +   + LD+GRF  G G+G+ SYVVP++IAEI P                 G +V Y  G+ + WR                     ESPRWLAK G DKE +  L+KLRG+  DI  EA EI++ +   +     +IR LF+ +Y   + IG+ LM+LQQ  G  GI  Y
Sbjct:  107 WLAISLAKDIIWLDMGRFLVGIGVGLISYVVPVYIAEITPKHVRGAFTFSNQLLQNCGVAVVYYFGNFLSWRTLAIIGSIPCWIQVIGLFFIPESPRWLAKKGRDKECEEVLQKLRGRKYDIVPEACEIKISVEASKKNSNINIRSLFEKRYAHQLTIGIGLMLLQQLCGTAGISSY 283          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL3_ARATH (Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.376e-27
Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            W+AV  +  S+ LDIGR  TG+ +G+ SYV+P++IAEI P                 G S+ Y+IG+ + WR                     ESPR L K G +KE + +L+ LRG DADI+ EA  I+  ++     PK+ + DLF+ +Y  SV+IGV LM+LQQ  G  G+ +Y
Sbjct:  113 WVAVALAKDSMWLDIGRLSTGFAVGLLSYVIPVYIAEITPKHVRGAFVFANQLMQSCGLSLFYVIGNFVHWRNLALIGLIPCALQVVTLFFIPESPRLLGKWGHEKECRASLQSLRGDDADISEEANTIKETMILFDEGPKSRVMDLFQRRYAPSVVIGVGLMLLQQLSGSSGLMYY 289          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.798e-27
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            W ++ F+   + L+ GR  +G G+G+ SYVVP++IAEI+P                +G ++ Y  G+ + WRI                    ESPRWLAKVG DKE + +L +LRG +ADI+REA++I+V    + +  K+S  DLF+ KY  ++++G+ LM++QQF G   +  Y
Sbjct:  116 WFSIAFAKDVMWLNFGRISSGIGLGLISYVVPVYIAEISPKHVRGTFTFTNQLLQNSGLAMVYFSGNFLNWRILALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLLRLRGGNADISREASDIEVMTKMVENDSKSSFCDLFQRKYRYTLVVGIGLMLIQQFSGSSAVLSY 292          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.230e-27
Identity = 62/177 (35.03%), Postives = 93/177 (52.54%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL + F+  +  L +GR   G+G+G+ SY VP++IAEIAP              +  G  +AY++G  +PWRI                    ESPRWLAK+G+  EF+ +L+ LRG + DIT E  EI+  + +          DL + +Y   +++G+ L+VLQQ  GI G+ FY
Sbjct:  129 WLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDITVEVNEIKRSVASSTKRNTVRFVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFY 305          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.165e-26
Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL++ F+  +  L +GR   G+G+G+ SY VP++IAEIAP              +  G  +AY++G  +PWRI                    ESPRWLAK+GL  +F+ +L+ LRG + DIT E  EI+  + +          DL + +Y   +++G+ L+ LQQ  GI G+ FY
Sbjct:  130 WLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGVLPCTLLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDITVEVNEIKRSVASSSKRSAVRFVDLKRRRYYFPLMVGIGLLALQQLGGINGVLFY 306          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.686e-23
Identity = 64/180 (35.56%), Postives = 87/180 (48.33%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVY---ILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            W A+ F+ G  LLD+GR   G  IG+  Y+ P++I EIAP                 G SV Y +G+I+ WR                     ESPRWLAKVG + E +  L  LRG+ +D++ EAAEI  Y   +   + +       LF+ KY  S+ IGV L+ L Q  G+ G  FY
Sbjct:  112 WFAIAFAKGVWLLDLGRLLQGISIGISVYLGPVYITEIAPRNLRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMVLPLLFFIPESPRWLAKVGREMEVEAVLLSLRGEKSDVSDEAAEILEYTEHVKQQQDIDDRGFFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFY 291          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.925e-21
Identity = 60/179 (33.52%), Postives = 86/179 (48.04%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYI--LTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLA+ F+    LLD+GR   G  +G+ SY+ PI+I+E+AP              +  G S  Y +G+ + WR                     ESPRWLAKVG +KE +  L  LRG  +D++ EAA I  Y   +  + +       LF+ KY   + IGV L+ + Q  G+ G  FY
Sbjct:  117 WLAIAFAKDVRLLDLGRLLQGISVGISSYLGPIYISELAPRNLRGAASSLMQLFVGVGLSAFYALGTAVAWRSLAILGSIPSLVVLPLLFFIPESPRWLAKVGREKEVEGVLLSLRGAKSDVSDEAATILEYTKHVEQQDIDSRGFFKLFQRKYALPLTIGVVLISMPQLGGLNGYTFY 295          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.359e-11
Identity = 51/176 (28.98%), Postives = 79/176 (44.89%), Query Frame = 2
Query:   35 LLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSII-----PWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAA----EIQVYILTLRSLPKASIRDLFKSKYI-RSVIIGVSLMVLQQFVGIKGIGFY 532
            LL +GR F G G+G+ S   P++I+E +P              I  G  ++Y+I          WR                     ESPRWL + G ++E +  LR++   + D+ +E       ++  IL   S  K ++  L K+K + R +I GV L V QQFVGI  + +Y
Sbjct:  123 LLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGTWRWMLGIAGIPALLQFVLMFTLPESPRWLYRKGREEEAKAILRRIYSAE-DVEQEIRALKDSVETEILEEGSSEKINMIKLCKAKTVRRGLIAGVGLQVFQQFVGINTVMYY 297          
The following BLAST results are available for this feature:
BLAST of DY260438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ERDL2_ARATH1.245e-2838.98Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
ERDL1_ARATH1.245e-2838.42Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
EDL12_ARATH1.054e-2737.29Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]
ERDL3_ARATH1.376e-2737.85Sugar transporter ERD6-like 3 OS=Arabidopsis thali... [more]
EDL18_ARATH1.798e-2736.16Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
ERDL6_ARATH5.230e-2735.03Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ERDL4_ARATH1.165e-2634.46Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
EDL15_ARATH2.686e-2335.56Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
EDL14_ARATH1.925e-2133.52Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
INT2_ARATH2.359e-1128.98Probable inositol transporter 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260438 ID=DY260438; Name=DY260438; organism=Citrus clementina; type=EST; length=1232bp
GTGGCTAGCTGTATTTTTCTCAAATGGATCTTTGTTACTTGACATTGGAA
GATTTTTCACAGGATATGGGATTGGAGTTTTCTCTTATGTGGTTCCAATA
TTTATAGCTGAAATAGCACCGAGGAATCTCCGTGGACTACTTACAACATT
GAATCAGCTCCTTATTGTTACTGGATCTTCAGTTGCGTACATAATAGGAT
CAATCATTCCATGGAGAATTCTGGCTCTGACTGGACTTGTTCCATGCGTT
TTGCTGCTTGTGGGTCTGTGCTTTGTTCCGGAGTCCCCTAGATGGCTGGC
AAAGGTTGGACTTGACAAAGAATTTCAGGTTGCTCTGCGAAAACTTCGTG
GCAAAGATGCCGATATTACTCGCGAAGCAGCTGAAATCCAAGTTTATATC
CTTACTCTTCGAAGCCTTCCAAAAGCTAGTATCCGGGATCTGTTCAAAAG
CAAATATATCCGCTCTGTGATTATTGGGGTGTCATTGATGGTATTACAAC
AGTTTGTTGGAATTAAGGGAATTGGATTCTATTACAAGTGAAACCCTTTG
TGCTAGCTGGTCTTTCCTCTGGAAAACTCCGGAACTATACTTTATGCCTG
TGTCAGGTTCCGATTACTGTAGTAGGTGATTTTTCTATGGATATAACACC
GCCAAACAACCCACTTCTTACGATTTCCACATATTGGAAACTCTTTTGGT
TCCCTCCCATCCCGCATCCTCCTTTTCTCTCCCCAGGGGCCTAACCTTTT
TTCACTAAATGCAACTCGCCAATAACCCCCCTTTCCTTAAACTAAATTCG
CCTCCATCTCAACTAACCCACTCACATCCGTGCCCCTCTCTCTCCTGTAT
GTTCATCAATCTACATGTTCTAACTACTACTCATACTCTCCGCGAGTGTC
GCATCCTCCTTGGCCGGCACCAGCTCCCTCTCATTGAATCATCCACAACT
ACTTATATCGCCTCACCACACACTTCCCGTTTCCTTCTACTTCCCCCTTC
AACGATAAACCTACGATTTCATTTACACTGACATTTTACCTTATTATTTC
TCAATGCTAGACCAACCCCCGCGCGCTCTTATCCCCCAACCTCTTCATCG
TACTCTTGATAAATCTCCCCCTATCACCTCTACCACTCATCACCCTCATG
CTCTACTCTATCTACAACTATCTCCAACTACCATCCCGCAGTCATTACTC
CCTCGCCTACCTTTCCTTCGACTCTCACATCT
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