DY260441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 2.210e-44 Identity = 95/205 (46.34%), Postives = 120/205 (58.54%), Query Frame = 2 Query: 71 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 M+SIGTGYDLS + FSPDGR FQ+EYA KAV+N T IGIKC DG+V VEKLI SK+++P N +I V RH G +GL DGR +V R + EA +++ +Y PIP+ A R+ YV TLY +RPFG I GG D++G LYM+EPSG + Y G A GKGR +AK E+ K Sbjct: 1 MTSIGTGYDLSNSVFSPDGRNFQVEYAVKAVENG---------------------------TTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEK 178
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.169e-43 Identity = 93/205 (45.37%), Postives = 123/205 (60.00%), Query Frame = 2 Query: 71 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 MSSIGTGYDL + FSPDGR+FQ EYA KAV+N+ T IGIKC+DG+++ +EK++ SK++ P N RI SV RH G+A G DG+ IV RA+ EAT++ YG PIP +A R+ +YV L T Y +RPFG + YD +GP LYM+EP+G+ + Y G A GKGR A+ E+ K Sbjct: 1 MSSIGTGYDLGLF-FSPDGRLFQAEYAYKAVENAS---------------------------TCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEK 177
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 6.446e-36 Identity = 86/208 (41.35%), Postives = 124/208 (59.62%), Query Frame = 2 Query: 71 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFE 691 MSSIGTGYDL+ +TFSPDGR+FQ+EYA KAVDN+G T+I I+ K+G+V+ +KLI+SK+ +N R+ +V+ + G+AVAG DG + A EA + Y EP+P++ +A VA Y+H+ TL RPFG G +++ G +L+++EPSG++Y Y A+GK R AAK EI K + Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAG---------------------------TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLK 180
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.243e-31 Identity = 79/227 (34.80%), Postives = 115/227 (50.66%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIELPKNHLRRCPNE 766 T YD ++T FSPDGR+FQ+EYA +AV T +GIK ++G+V+GV+K + SK++ P S +++ + H G A AGL AD R +V RA+ EA Y YGEPI V L + + + T + +RPFG +++ G D G +L+ +PSG + TAIG+GR A E +R D+ + IEL L E Sbjct: 8 TAYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFE--EEYREDMTLQEAIELAVRALYEASRE 205
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.099e-30 Identity = 79/215 (36.74%), Postives = 113/215 (52.56%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 GYD ++T FSPDGR+FQ+EYA +AV T +G+K K+GIV+ V+K SK++ P S +I + H G A +GL AD R I+ +A+ EA Y EPI V+ LA+++ + T + +RPFG +I+GG + G +L+ +PSG Y TAIG GRPAA E K + +D+ IEL Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEK--KYSDDMNLNQAIEL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 9.016e-30 Identity = 68/193 (35.23%), Postives = 104/193 (53.89%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 GYD ++T FSPDGR+FQ++YA +AV T +G+KCKDG+V+ VEK + SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ + T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A Sbjct: 9 GYDRAITVFSPDGRLFQVQYAREAVKRGA---------------------------TAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTA 173
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.177e-29 Identity = 77/207 (37.20%), Postives = 112/207 (54.11%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDL 709 GYD ++T FSPDGR+FQ+EYA +AV T IGIKCK+G+++ +K + SK++ + +I+ + H A +GL AD R ++ RA+ EA Y EPI VKELA+++ + T Y +RPFG +++ G D + P+LY +PSG Y TAIG GR A TE + E +R+DL Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGA---------------------------TAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVD-EVPKLYETDPSGALLEYKATAIGMGRNAV-TEFFEKE-YRDDL 183
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.538e-29 Identity = 76/216 (35.19%), Postives = 113/216 (52.31%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFE-AFRNDLPNKGFIEL 733 GYD ++T FSPDGR+FQ+ YA +AV T +G+K K+G+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + D P+LY +PSG + + AIG GR T + FE + +DL +G I+L Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-DKPELYETDPSGAYFEWRAVAIGSGR---NTAMAIFEDHYSDDLDMEGAIKL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.623e-29 Identity = 73/215 (33.95%), Postives = 111/215 (51.63%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 GYD ++T FSPDGR+FQ+ YA +AV T +G+KC +G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP PV + +++ + T Y +RPFG +++ G + D P+LY +PSG + + AIG GR A E +R+D+ + I+L Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGIN-DRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFE--EKYRDDMNLEDAIKL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.474e-29 Identity = 72/208 (34.62%), Postives = 110/208 (52.88%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFE-AFRNDL 709 GYD ++T FSPDGR+FQ+ YA +AV T +G+KCKDG+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA + YGEP P+ + +++ + T Y +RPFG +++ G + D P+LY +PSG + + AIG GR T + FE +R+D+ Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN-DKPELYETDPSGAYFAWKAVAIGSGR---NTAMAIFEDKYRDDM 185 The following BLAST results are available for this feature:
BLAST of DY260441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260441 ID=DY260441; Name=DY260441; organism=Citrus clementina; type=EST; length=1052bpback to top |