DY260441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 7.632e-29 Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIELPKNHLRRCPNEA*GKGL*TWKWTGVREESKPPPTQRVQK 850 GYD ++T FSPDGR+FQ+ YA +AV T +G+K KDG+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A E +R+D+ I+L L + E +G+ T + K P + ++K Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFE--EHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPREELEK 232
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 7.632e-29 Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIELPKNHLRRCPNEA*GKGL*TWKWTGVREESKPPPTQRVQK 850 GYD ++T FSPDGR+FQ+ YA +AV T +G+K KDG+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A E +R+D+ I+L L + E +G+ T + K P + ++K Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFE--EHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPREELEK 232
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.900e-28 Identity = 72/215 (33.49%), Postives = 110/215 (51.16%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 GYD ++T FSPDGR+FQ+ YA +AV T +G+K K G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+LY +PSG + + AIG GR A E + +D+ +G I+L Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFE--EHYSDDIDMEGAIKL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.438e-28 Identity = 71/216 (32.87%), Postives = 111/216 (51.39%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 + YD ++T FSP+GR++Q+EYA +AV T IGI CKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA Y YGE I ++ LA+++ T + +RPFG +++ G D++ +L+ +PSG Y TAIG GRP + K +R+D+ +EL Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVRRG---------------------------TTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEK--EYRDDITLDEGLEL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.102e-27 Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEA-FRNDL 709 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y EPI V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y TAIG GR A + FEA +R D+ Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAV---VEVFEADYREDM 183
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.439e-27 Identity = 69/215 (32.09%), Postives = 111/215 (51.63%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 GYD ++T FSPDGR+FQ+ YA +AV T +G+KC +G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA + YGEP P+ + +++ + T Y +RPFG +++ G + + P+LY +PSG + + AIG GR A E +++D+ + I+L Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGA---------------------------TAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN-EKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFE--EKYKDDMSLEEAIKL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.439e-27 Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y TAIG GRP A Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG---------------------------TTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIA 174
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.439e-27 Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y TAIG GRP A Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG---------------------------TTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIA 174
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.439e-27 Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y TAIG GRP A Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG---------------------------TTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIA 174
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.880e-27 Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y TAIG GRP A Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG---------------------------TTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVA 174 The following BLAST results are available for this feature:
BLAST of DY260441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260441 ID=DY260441; Name=DY260441; organism=Citrus clementina; type=EST; length=1052bpback to top |