DY260441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.455e-27 Identity = 77/223 (34.53%), Postives = 114/223 (51.12%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEA-FRNDLPNKGFIELPKNHLRR 754 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y EPI V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y TAIG GR A + FEA +R D+ I L + L R Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAV---VEVFEAEYRQDMNMDAAILLGMDALYR 200
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.470e-27 Identity = 68/194 (35.05%), Postives = 100/194 (51.55%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 +GYD ++T FSP+GR++Q+EYA +AV T +GIKC DG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y TAIG GRP A Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG---------------------------TTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIA 174
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.591e-26 Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 GYD ++T FSPDGR+FQ+EYA +AV T IGIKC +GIV+ V+K S ++ S +I + H G A +GL AD R +V RA+ EA + Y EPI V L++++ + + T +RPFG +I+GG +L+ +PSG Y TAIG GR AA Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAA 173
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.591e-26 Identity = 75/217 (34.56%), Postives = 105/217 (48.39%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDL 709 T YD V TFSP+GR+FQ+EYA +A+ T IG+K K+G+V+ VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q LC L RPFG +++ G+D +GP LY +PSG ++ G AIG G A + + E F DL Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGS---------------------------TAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQ--EQFNKDL 187
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.078e-26 Identity = 71/216 (32.87%), Postives = 109/216 (50.46%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFE-AFRNDLPNKGFIEL 733 GYD ++T FSPDGR++Q+EYA +AV T +GIKC +G+V+ V+K + S+++ P S +I + H G+A +GL D R +V RA+ E+ Y EPI V+ LA+++ ++ T + RP+G +++ G +L+ +PSG Y T IG GRPA I FE ++ D G I L Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKRG---------------------------TTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEARLFETDPSGTLLEYKATGIGTGRPAV---IKTFEDEYQEDADFSGAIRL 193
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.715e-26 Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEA-FRNDL 709 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y E I V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y TAIG GR A + FEA +R D+ Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAV---VEVFEADYREDM 185
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.032e-25 Identity = 71/210 (33.81%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 92 YDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW------------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 YD V TFSP+GR+FQ+EYA +A+ T IG+K KD +V+GVEK + S +M S ++ + H G A++GL AD R I+ A+ + N+ Y EP ++ Q + C L RPFG +++ G D GPQLY EPSG +RY AIG G AK+E+ K Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS---------------------------TAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSI------CDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVK 184
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.032e-25 Identity = 74/217 (34.10%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 86 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDL 709 T YD V TFSP+GR+FQ+EYA +A+ T IG+K K+G+V+ VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q LC L RPFG +++ G+D +GP LY +PSG ++ AIG G A + + E F DL Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGS---------------------------TAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ--EQFNKDL 187
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.347e-25 Identity = 71/208 (34.13%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEA-FRNDL 709 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y E I V+ +++++ + T Y +RP+G +++ G D P+L+ +PSG Y TAIG GR A + FEA ++ D+ Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKRG---------------------------TTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAV---VEVFEADYKEDM 183
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.347e-25 Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAA 667 GYD ++T FSPDGR++Q+EYA +AV T +GIK DG+V+ V+K ++SK++ S +I + H G+A +GL D R +V RA+ E Y E I V+ LA+++ ++ T Y +RP+G +++ G +L+ +PSG Y T IG GRPAA Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKRG---------------------------TTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAA 173 The following BLAST results are available for this feature:
BLAST of DY260441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260441 ID=DY260441; Name=DY260441; organism=Citrus clementina; type=EST; length=1052bpback to top |