DY260444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_NEUCR (60S ribosomal protein L40 OS=Neurospora crassa GN=ubi-1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.436e-17 Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL ALA K+N DKMICRKCYARL PRA NC K+KCGH+NQLRPK K+K Sbjct: 1 IIEPSLKALASKFNCDKMICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_SCHPO (60S ribosomal protein L40 OS=Schizosaccharomyces pombe GN=ubi1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.449e-17 Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL ALA KYN +K ICRKCYARL PRA NC KKKCGH+NQLRPK K+K Sbjct: 1 IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKKKLK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_YEAST (60S ribosomal protein L40 OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.199e-17 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL ALA KYN DK +CRKCYARL PRA NC K+KCGH+NQLRPK K+K Sbjct: 1 IIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_CRYNE (60S ribosomal protein L40 OS=Cryptococcus neoformans GN=UBI1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 7.879e-16 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL ALA KYN +K ICRKCYARL PRA NC K+KCGHS+Q+RPK +K Sbjct: 1 IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKRKCGHSSQIRPKKALK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_EIMBO (60S ribosomal protein L40 OS=Eimeria bovis PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.755e-15 Identity = 39/52 (75.00%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL LA KYN +K ICRKCYARL PRA NC KKKCGH++QLRPK K K Sbjct: 1 IIEPSLALLASKYNCEKKICRKCYARLPPRATNCRKKKCGHTSQLRPKKKPK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_CAEEL (60S ribosomal protein L40 OS=Caenorhabditis elegans GN=ubq-2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.755e-15 Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL LA+KYN DK ICRKCYARL PRA NC KKKCGHS++LR K K+K Sbjct: 1 IIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_TOBAC (60S ribosomal protein L40 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.780e-13 Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCY--------------------ARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 IIEPSL ALA K+N DKMICRKCY ARL PRA NC K+KCGH+N +RPK K+K Sbjct: 1 IIEPSLKALASKFNCDKMICRKCYVRCPRRTPQRTCRVLTWIPQARLPPRATNCRKRKCGHTNHVRPKKKLK 72
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_TETPY (60S ribosomal protein L40 OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.065e-12 Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 105 IEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 +EP++ ALA+KYN +K +CR CYARL P+A NC K+KCGHSN LR K K K Sbjct: 2 MEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKCGHSNSLRLKKKPK 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_LEITA (60S ribosomal protein L40 OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.047e-12 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 ++EP+L+ALA+KYN +K +CR+CYARL RA NC KK CGH + LR K K++ Sbjct: 1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
BLAST of DY260444 vs. ExPASy Swiss-Prot
Match: RL40_LEIMA (60S ribosomal protein L40 OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.047e-12 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 102 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCTKKKCGHSNQLRPKNKIK 257 ++EP+L+ALA+KYN +K +CR+CYARL RA NC KK CGH + LR K K++ Sbjct: 1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52 The following BLAST results are available for this feature:
BLAST of DY260444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260444 ID=DY260444; Name=DY260444; organism=Citrus clementina; type=EST; length=1339bpback to top |