DY260451

Overview
NameDY260451
Unique NameDY260451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1302
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260451_ssr13 microsatellite DY260451_ssr13:13..34. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1536 contig Ccv1_Contig1536:1..1302. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_NEUCR (Translationally-controlled tumor protein homolog OS=Neurospora crassa GN=NCU06464 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 5.078e-20
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLL------TPKLSEERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            ML+Y D++TGDE++SDS+  KE++ GI +EV+   + +GAV VDIGAN S               KV ++VH+FRLQ    FDKK ++ Y+K ++K +        K  EE ++   K    A   +L+   D +F+ GESM+ DG +V   Y+   T P
Sbjct:    1 MLIYSDIITGDEIISDSYDLKEVD-GIAYEVDCAMIEEGAVQVDIGANAS--AEEADEALDDGVVKVNNVVHSFRLQ-STQFDKKGYLVYLKGYMKSVKNALKEQGKSDEEIKDFETKASAFAKNVILAKFKDWEFYTGESMNPDGMVVLLNYREDGTTP 156          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.131e-19
Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE--ERQEIFKKNIEGATKF----LLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            ML+Y D+L GDEL+SDS+  KE++ GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+K ++K +  KL E     E  K    GA+KF    ++    D +F+ GESM  DG +V   Y+     P
Sbjct:    1 MLIYNDILNGDELISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANAS--AEEAAEDLDDGAVKVNNIVNSFRLQ-STTFDKKSYLAYLKGYMKAIKAKLQENGSSAEDIKAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVVLLNYREDGVTP 156          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_CANGA (Translationally-controlled tumor protein homolog OS=Candida glabrata GN=CAGL0L12870g PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.131e-19
Identity = 56/157 (35.67%), Postives = 89/157 (56.69%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+D+ +GDELLSD++   E++ G+++E +   V  G  ++DIGANPS                V ++VH+FRLQ    FDKK F+TY+K ++K +  KL E+  +    F+K  +   K ++ +  D +FF GESM  D  +V   Y+   T P
Sbjct:    1 MIIYKDIFSGDELLSDAYDINEVD-GVIYEADCAMVKVGGDNIDIGANPSTEDGEDDVEDGTEV--VNNVVHSFRLQ-PTGFDKKSFLTYIKGYMKAVKAKLQEKNPDAIPTFEKGAQVYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.292e-19
Identity = 58/158 (36.71%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            ML+Y+D+++GDEL+SD++  KE+++ I++E + + V V+   DVDIGANPS                V ++V++FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+N  D  F++GESM  D  +V   Y+     P
Sbjct:    1 MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITP 154          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_YEAST (Translationally-controlled tumor protein homolog OS=Saccharomyces cerevisiae GN=TMA19 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+D+ + DELLSD++  K +++ +++E +   V  G  ++DIGANPS                V ++VH+FRLQ Q AFDKK F+TY+K ++K +  KL E   E    F+K  +   K ++ +  D +FF GESM  D  +V   Y+   T P
Sbjct:    1 MIIYKDIFSNDELLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_DANRE (Translationally-controlled tumor protein homolog OS=Danio rerio GN=tpt1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.333e-19
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRL 515
            M++Y+D++TGDE+ SD +  KE ENG++ EVEGK + +   D+D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E    R + F  N     K +L N+ + QFF GESM+ DG +
Sbjct:    1 MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSG--VDIVLNHKLQE-TSYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMI 145          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_ASPOR (Translationally-controlled tumor protein homolog OS=Aspergillus oryzae GN=AO090005000996 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.634e-18
Identity = 58/160 (36.25%), Postives = 86/160 (53.75%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFD----KKPFVTYMKRFI-KLLTPKLSEERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+D+LTGDE++SD+F  KE++N ILWEV+ + +  G  ++ + GANPS               +V+DI H FRL + P  +    KK    YMK+ + KL   K  EE  + FK+N + A K +L+N  D    VGES   D   +   Y+     P
Sbjct:    1 MIIYKDILTGDEIISDAFNLKEVDN-ILWEVDCRNITIGDENIQLEGANPSAEGEDDDAGGAGNAEQVLDIKHNFRLNDYPKLEKDEYKKAIKGYMKKVLAKLEEKKAPEETIKEFKENAQTALKRILANYKDYDVLVGESFGADAMHILINYREDGVTP 159          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_YARLI (Translationally-controlled tumor protein homolog OS=Yarrowia lipolytica GN=YALI0E27071g PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.787e-18
Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++++D+++ DE+ SD+F  K ++N +++EV+   +     DVDIGANPS                V ++VH+FRLQ    FDKK ++TY+K ++K +   L+E   E  E F+K  +   K +++N  D  F+ GESM  DG +    Y+   T P
Sbjct:    1 MIIFKDVISNDEMCSDAFEPKVVDN-VVYEVDCTMIQVAEGDVDIGANPSAEDAEEGVDSDVQT--VNNVVHSFRLQST-GFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKIVANFKDFDFYTGESMDPDGMVALLNYREDGTTP 153          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_LABRO (Translationally-controlled tumor protein homolog OS=Labeo rohita GN=tpt1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.787e-18
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRL 515
            M++Y+D++TGDE+ SD +  KE ENG++ EVEGK + +   ++D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E   +R + F  N     K +L N+ + QFF GESM+ DG +
Sbjct:    1 MIIYKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVSG--VDIVLNHKLQE-TSYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMI 145          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.753e-18
Identity = 60/152 (39.47%), Postives = 81/152 (53.29%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYK 533
            M +++D+ TGDE+ SD++  K I+N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL    DLQFF GESM  +G +    Y+
Sbjct:    1 MKIWKDIFTGDEMFSDTYKVKLIDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDAATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYR 149          
The following BLAST results are available for this feature:
BLAST of DY260451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TCTP_NEUCR5.078e-2037.50Translationally-controlled tumor protein homolog O... [more]
TCTP_GIBZE1.131e-1938.13Translationally-controlled tumor protein homolog O... [more]
TCTP_CANGA1.131e-1935.67Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHPO3.292e-1936.71Translationally-controlled tumor protein homolog O... [more]
TCTP_YEAST5.615e-1936.31Translationally-controlled tumor protein homolog O... [more]
TCTP_DANRE7.333e-1937.84Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPOR1.634e-1836.25Translationally-controlled tumor protein homolog O... [more]
TCTP_YARLI2.787e-1834.39Translationally-controlled tumor protein homolog O... [more]
TCTP_LABRO2.787e-1837.16Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL4.753e-1839.47Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YI10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260451 ID=DY260451; Name=DY260451; organism=Citrus clementina; type=EST; length=1302bp
CTCACCGCTGCGTCTCTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGA
TTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTA
TCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTCCCTACA
AGGAAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTA
CAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGC
TGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTTGACATTG
TCCACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAGCCGTTT
GTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGA
GGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCT
TGCTCTCGAACCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCAT
GATGATGGCCGGCTTGTCTTTGCTTACTACAAGGCACGTGCGACCCACCC
CAACTTTTCTGCATACGGCTGCTGCCTTGCAGGAAGCCCACCTGCTACCC
CGGCCTTCCACAAAAACGCACCCGCACCACTTACCCATCTCAACAACCCC
CCCCCCCAATCCTTACACCACCCTAAGACCACAGCCCCCCCACAACCCGC
AATCCAAGCCTACTAATTATTATCCTTCACAACACCTAAAACGCCATTTA
ACGCGCCAAATCACTCCACTCTCTATTCCCGACATAACAAAACAATAACA
CCACACCGAATACATCTACATACTCCACCACCCACACCCATCTTCACAAT
TCACACCCTTCCCCCCTCTCATCAACCCTCACCTCCCACAACCTCACCCC
CACCCCACCGCCCTCTACCCCCTCACGACCAATCCCCCACCCTCTTCTCC
CGAGGCCTCCCATTGTTATGCTAGTCGTTGGACCGTGCTCCCCCTAGCCC
ATCCGCCAGGTTTCGACCTCGCGTTCCTCTTCCCCAGCCCTCATCTCCAC
TACACATACCCCATACCCCTCCCTATTTTTACCTTCTACCTCCTCGCCAC
CCAACCCCAGAACTACCACTATCCTCCCCACACCTACCACTCCTCACTCC
ACCCTCCAATCCCCACATCTACACGTCTATCCCTCCCTCTACACCTCCAC
ATCCCATATCCATCACATTGTCTGTCATCCCTGCTCAGACAGTGAACCTC
ATCTCAAACAGAATCACACATGCCTGCCCTCTCAGCTTCACAGCAATCCA
AT
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