DY260451

Overview
NameDY260451
Unique NameDY260451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1302
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.810e-16
Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYK 533
            M +Y+D++TGDE+ +D++  K ++  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L    +LQFF GESM  DG +    Y+
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYR 150          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_PIG (Translationally-controlled tumor protein OS=Sus scrofa GN=TPT1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.911e-16
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+N  + QFF+GE+M+ DG +    Y+     P
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.911e-16
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+N  + QFF+GE+M+ DG +    Y+     P
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_HUMAN (Translationally-controlled tumor protein OS=Homo sapiens GN=TPT1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.911e-16
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+N  + QFF+GE+M+ DG +    Y+     P
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_BOVIN (Translationally-controlled tumor protein OS=Bos taurus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.294e-15
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DL++ DE+ SD +  +E+ +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+N  + QFF+GE+M+ DG +    Y+     P
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMX (Translationally-controlled tumor protein homolog OS=Psetta maxima GN=tpt1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.691e-15
Identity = 54/159 (33.96%), Postives = 81/159 (50.94%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DLL+GDE+ S+ +  +E+E GIL EVEGK +   +   D   GANPS                 VDI+   +L     ++KK +  Y+K+++K L  KL E   ER + F     GA K +L    D +F+ GESM+ D  +    Y+     P
Sbjct:    1 MIIYKDLLSGDEMFSNIYKIRELEGGILLEVEGKRITRTEAIDDSAFGANPSAEELSEANEAAVSSG--VDIILNHKL-ISTLYNKKQYSAYIKKYMKDLKTKLEETNPERVDAFVAGAVGAVKMILGKFKDFEFYTGESMNHDAMVGLLDYREDGITP 156          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.691e-15
Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYK 533
            M +Y+D++TGDE+ +D++  K +++ +++EV GK + +   D+ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L    +LQFF GESM  DG +    Y+
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYR 150          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.691e-15
Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 3
Query:   90 MLVYQDLL--TGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXXK-VVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHPNF 557
            M V++D++  + DEL SD++P  EI NG+++EV+ K V +   V V+ GAN +               K V+++V   RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+     K +L    + +F+ GE+M  DG +   YYK     P F
Sbjct:    1 MRVFKDIVGYSHDELCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEEDEGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIF 162          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.884e-15
Identity = 54/160 (33.75%), Postives = 84/160 (52.50%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+DL++ DE+ SD +  +EI  G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+N  + QF++GE+M+ DG +    Y+     P
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_XENTR (Translationally-controlled tumor protein homolog OS=Xenopus tropicalis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.919e-15
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+D +T DE+ SD +   E  +G+ +EVEGK +  V+GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++KL+  KL E   +R + F K I+   K +L N  + QF+ GE M+ DG +    Y+     P
Sbjct:    1 MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAECQEEDIGGATTVSGVDIVINHKLQE-TGFTKDSYKNYIKDYVKLVKAKLEETDPDRVKPFMKGIQDRVKLILGNFKNYQFYTGERMNPDGMVALLDYREDGVTP 158          
The following BLAST results are available for this feature:
BLAST of DY260451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TCTP_DROYA5.810e-1634.64Translationally-controlled tumor protein homolog O... [more]
TCTP_PIG9.911e-1634.38Translationally-controlled tumor protein OS=Sus sc... [more]
TCTP_PANTR9.911e-1634.38Translationally-controlled tumor protein OS=Pan tr... [more]
TCTP_HUMAN9.911e-1634.38Translationally-controlled tumor protein OS=Homo s... [more]
TCTP_BOVIN1.294e-1533.75Translationally-controlled tumor protein OS=Bos ta... [more]
TCTP_PSEMX1.691e-1533.96Translationally-controlled tumor protein homolog O... [more]
TCTP_DROME1.691e-1534.64Translationally-controlled tumor protein homolog O... [more]
TCTP1_DICDI1.691e-1533.13Translationally-controlled tumor protein homolog 1... [more]
TCTP_RABIT2.884e-1533.75Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_XENTR4.919e-1532.08Translationally-controlled tumor protein homolog O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP12YI10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260451 ID=DY260451; Name=DY260451; organism=Citrus clementina; type=EST; length=1302bp
CTCACCGCTGCGTCTCTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGA
TTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTA
TCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTCCCTACA
AGGAAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTA
CAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGC
TGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTTGACATTG
TCCACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAGCCGTTT
GTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGA
GGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCT
TGCTCTCGAACCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCAT
GATGATGGCCGGCTTGTCTTTGCTTACTACAAGGCACGTGCGACCCACCC
CAACTTTTCTGCATACGGCTGCTGCCTTGCAGGAAGCCCACCTGCTACCC
CGGCCTTCCACAAAAACGCACCCGCACCACTTACCCATCTCAACAACCCC
CCCCCCCAATCCTTACACCACCCTAAGACCACAGCCCCCCCACAACCCGC
AATCCAAGCCTACTAATTATTATCCTTCACAACACCTAAAACGCCATTTA
ACGCGCCAAATCACTCCACTCTCTATTCCCGACATAACAAAACAATAACA
CCACACCGAATACATCTACATACTCCACCACCCACACCCATCTTCACAAT
TCACACCCTTCCCCCCTCTCATCAACCCTCACCTCCCACAACCTCACCCC
CACCCCACCGCCCTCTACCCCCTCACGACCAATCCCCCACCCTCTTCTCC
CGAGGCCTCCCATTGTTATGCTAGTCGTTGGACCGTGCTCCCCCTAGCCC
ATCCGCCAGGTTTCGACCTCGCGTTCCTCTTCCCCAGCCCTCATCTCCAC
TACACATACCCCATACCCCTCCCTATTTTTACCTTCTACCTCCTCGCCAC
CCAACCCCAGAACTACCACTATCCTCCCCACACCTACCACTCCTCACTCC
ACCCTCCAATCCCCACATCTACACGTCTATCCCTCCCTCTACACCTCCAC
ATCCCATATCCATCACATTGTCTGTCATCCCTGCTCAGACAGTGAACCTC
ATCTCAAACAGAATCACACATGCCTGCCCTCTCAGCTTCACAGCAATCCA
AT
back to top