DY260451

Overview
NameDY260451
Unique NameDY260451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1302
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12
Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVD-IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHPNF 557
            M V++D ++GDE+ SDS    ++ N +++EV+  ++ V   +D   I ANPS               +V+D+VH  RL    +FDKK +  Y+K ++K +  +L +E  E   IF+  I      +  N  D + ++GESM+ DG +    ++     P F
Sbjct:    1 MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTE--RVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYF 157          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12
Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLS--NLSDLQFFVGESMHD---DGRLVFAYYK 533
            ML+++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLS      LQFF+GE M +   +G++    Y+
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERMAEGQGEGQVAVVEYR 159          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_PLAKN (Translationally-controlled tumor protein homolog OS=Plasmodium knowlesi GN=TCTP PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.682e-12
Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHPNF 557
            M VY+D+ T DE+ SDS+    P+   +   I +EV+    ++G  D  I  N                 +V+DIV +F+L    +  KK +  Y+K +++ +   L E   +R ++FK   +   K +L+N  D +F++GES+  D  L ++YYK     P F
Sbjct:    1 MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSEEAVDGMGADVE----QVIDIVDSFQLTST-SLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRF 159          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: FKSG2_HUMAN (Putative apoptosis inhibitor FKSG2 OS=Homo sapiens GN=FKSG2 PE=5 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11
Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEG---ATKFLLSNLSDLQFFVGESMHDDGRLVFAYYK 533
            M+++QDL++ +E+ SD +   EI NG+  EVE K + +   + D   IG N S                 VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  I G     K + +N  + QFF+GE+++  G +    Y+
Sbjct:    1 MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITS-VDIVTNHHLQES-IFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGNEEQIKHIFANFQNYQFFIGENLNPPGMVALLNYR 152          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLL---TPKLSEERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHP 551
            M++Y+D +T DE+ SD +   E  +G+  EVEGK +   +GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++K L     K + ER   F K  +   K +L N  + QF+ GE M+ DG +    Y+     P
Sbjct:    1 MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQE-TGFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLLDYREDGITP 158          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_TRIPS (Translationally-controlled tumor protein homolog OS=Trichinella pseudospiralis PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.934e-11
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLL--SNLSDLQFFVGESMH-DDGRLVFAYYK 533
            M++Y+DL +GDEL SD+FP K + N +++E  GK VV+   +V + GANPS                 +DIV   +L E P + D K F  ++K ++K L  K+     SEE    FKKN++     LL      +LQFF G   +  +G+L    Y+
Sbjct:    1 MIIYRDLFSGDELCSDTFPMK-LVNDVVFEFTGKHVVRKLGEVTLEGANPSAEEFDEGTEEQMESG--IDIVLNHQLMEMPMYQDIKIFKDWIKEYMKKLVEKMKSDGESEESISKFKKNMQEYVTSLLKKDRFKELQFFSGPGENAAEGQLAIVEYR 155          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_LUMRU (Translationally-controlled tumor protein homolog OS=Lumbricus rubellus GN=TCTP PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.350e-11
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAV--DVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEER---QEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYKARATHPNFSAYG 569
            M++++D+  G EL SDSFP   + N  +++V+GK         D  IG N S                 VDIV   RL E  A  KK ++T++K ++K +  KL E +    E+F+KN++   K +L++  + Q F GESM  +G L    +     +  F  +G
Sbjct:    1 MIIFKDVFPGVELFSDSFPVSLV-NETVYKVKGKLRTDTFAIDDKAIGGNASAEGGEEGTDAASKQG--VDIVMNSRLVEY-ALSKKDYMTHIKSYMKSVKDKLQETKPADSELFQKNVQPFIKEVLNDFKEYQLFCGESMGPEGMLALMKWDGETPYMFFFKHG 161          
BLAST of DY260451 vs. ExPASy Swiss-Prot
Match: TCTP_IXOSC (Translationally-controlled tumor protein homolog OS=Ixodes scapularis GN=Tctp PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.600e-11
Identity = 51/155 (32.90%), Postives = 79/155 (50.97%), Query Frame = 3
Query:   90 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ--GAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVHTFRLQEQPAFDKKPFVTYMKRFIKLLTPK-----LSEERQEIFKKNIEGATKFLLSNLSDLQFFVGESMHDDGRLVFAYYK 533
            ML+++D+LTGDE+ +DS  YK +++  ++E+E + V +  G V +D GANPS                 +D+V   RL E   F K  +  Y+K + K L  K      SE      K  +  A K +L  + D+QFF+GES + DG +    Y+
Sbjct:    1 MLLFKDILTGDEMFTDSVKYKLVDD-CIFEIECEHVTRKVGEVALD-GANPSAEEVEEGTEEGTESG--LDLVLNMRLVE-TGFSKTDYKNYLKTYTKALMDKWKEDGKSEAEVNEAKSKLTEAVKKVLPRIGDMQFFLGESSNPDGIVALLEYR 150          
The following BLAST results are available for this feature:
BLAST of DY260451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TCTP_SCHJA2.984e-1229.81Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA2.984e-1233.13Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAKN8.682e-1229.27Translationally-controlled tumor protein homolog O... [more]
FKSG2_HUMAN1.134e-1131.82Putative apoptosis inhibitor FKSG2 OS=Homo sapiens... [more]
TCTP_XENLA1.481e-1130.19Translationally-controlled tumor protein homolog O... [more]
TCTP_TRIPS1.934e-1134.81Translationally-controlled tumor protein homolog O... [more]
TCTP_LUMRU7.350e-1130.91Translationally-controlled tumor protein homolog O... [more]
TCTP_IXOSC9.600e-1132.90Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YI10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260451 ID=DY260451; Name=DY260451; organism=Citrus clementina; type=EST; length=1302bp
CTCACCGCTGCGTCTCTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGA
TTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTA
TCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTCCCTACA
AGGAAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTA
CAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGC
TGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTTGACATTG
TCCACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAGCCGTTT
GTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGA
GGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCT
TGCTCTCGAACCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCAT
GATGATGGCCGGCTTGTCTTTGCTTACTACAAGGCACGTGCGACCCACCC
CAACTTTTCTGCATACGGCTGCTGCCTTGCAGGAAGCCCACCTGCTACCC
CGGCCTTCCACAAAAACGCACCCGCACCACTTACCCATCTCAACAACCCC
CCCCCCCAATCCTTACACCACCCTAAGACCACAGCCCCCCCACAACCCGC
AATCCAAGCCTACTAATTATTATCCTTCACAACACCTAAAACGCCATTTA
ACGCGCCAAATCACTCCACTCTCTATTCCCGACATAACAAAACAATAACA
CCACACCGAATACATCTACATACTCCACCACCCACACCCATCTTCACAAT
TCACACCCTTCCCCCCTCTCATCAACCCTCACCTCCCACAACCTCACCCC
CACCCCACCGCCCTCTACCCCCTCACGACCAATCCCCCACCCTCTTCTCC
CGAGGCCTCCCATTGTTATGCTAGTCGTTGGACCGTGCTCCCCCTAGCCC
ATCCGCCAGGTTTCGACCTCGCGTTCCTCTTCCCCAGCCCTCATCTCCAC
TACACATACCCCATACCCCTCCCTATTTTTACCTTCTACCTCCTCGCCAC
CCAACCCCAGAACTACCACTATCCTCCCCACACCTACCACTCCTCACTCC
ACCCTCCAATCCCCACATCTACACGTCTATCCCTCCCTCTACACCTCCAC
ATCCCATATCCATCACATTGTCTGTCATCCCTGCTCAGACAGTGAACCTC
ATCTCAAACAGAATCACACATGCCTGCCCTCTCAGCTTCACAGCAATCCA
AT
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