DY260454
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.452e-17 Identity = 45/145 (31.03%), Postives = 79/145 (54.48%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFL-RNTPRNAPAVE-SYNDLKFNVDCTHLIQLGITLSDNEGKISY---TFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ ++ I VW N E M + ++ + +++D EFPG + R +++ Y L+ NVD +IQLG+T ++ +G+ T++FNF F+L +D+++ DSI LL +SGL F K ++GI + F ++ V
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGV 145 HSP 2 Score: 42.3578 bits (98), Expect = 1.452e-17 Identity = 18/49 (36.73%), Postives = 27/49 (55.10%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
+N+KW++FH YD Y+VK+ T LP + LFF S +D +
Sbjct: 149 DNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.452e-17 Identity = 45/145 (31.03%), Postives = 79/145 (54.48%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFL-RNTPRNAPAVE-SYNDLKFNVDCTHLIQLGITLSDNEGKISY---TFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ ++ I VW N E M + ++ + +++D EFPG + R +++ Y L+ NVD +IQLG+T ++ +G+ T++FNF F+L +D+++ DSI LL +SGL F K ++GI + F ++ V
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGV 145 HSP 2 Score: 42.3578 bits (98), Expect = 1.452e-17 Identity = 18/49 (36.73%), Postives = 27/49 (55.10%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
+N+KW++FH YD Y+VK+ T LP + LFF S +D +
Sbjct: 149 DNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.453e-17 Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N E M + + F+ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI + F ++ V
Sbjct: 2 PAATVDHSQRICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGV 145 HSP 2 Score: 38.5058 bits (88), Expect = 1.453e-17 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI ++ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFFPIIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.456e-17 Identity = 45/145 (31.03%), Postives = 76/145 (52.41%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F + V
Sbjct: 2 PAATVDHSQRICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGV 145 HSP 2 Score: 41.2022 bits (95), Expect = 2.456e-17 Identity = 19/49 (38.78%), Postives = 27/49 (55.10%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP Q + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_XENTR (CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis GN=cnot7 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.397e-17 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D+ I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F + V
Sbjct: 2 PAATVDLSQRICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGV 145 HSP 2 Score: 38.5058 bits (88), Expect = 5.397e-17 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEVELDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.397e-17 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F ++ V
Sbjct: 2 PAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGV 145 HSP 2 Score: 39.6614 bits (91), Expect = 5.397e-17 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 5.397e-17 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F ++ V
Sbjct: 2 PAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGV 145 HSP 2 Score: 39.6614 bits (91), Expect = 5.397e-17 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.397e-17 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F ++ V
Sbjct: 2 PAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGV 145 HSP 2 Score: 39.6614 bits (91), Expect = 5.397e-17 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.397e-17 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 2
Query: 38 PSLDLDIVSTIRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSV 457
P+ +D I VW N + M + ++ ++ +++D EFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI F ++ V
Sbjct: 2 PAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGV 145 HSP 2 Score: 39.6614 bits (91), Expect = 5.397e-17 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query: 469 ENLKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFDPNF 615
E +KW++FH YD YL+KI T+ LP + LFF +D +
Sbjct: 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197
BLAST of DY260454 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.403e-17 Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = 2
Query: 68 IRTVWCENYELLMPFLDNLLNCFDVLSIDAEFPG--------FLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYT-------FEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIPKDGIPQVCFCSKILGGSVPNTERIS 478
IR VW N + +++ F +++D EFPG F N N Y LK NVD LIQ+G+T SD G + ++FNF +F++ +D++A +SI+LL+ G+DF K + GI V F ++ + + IS
Sbjct: 12 IREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLN------YRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAIS 157 HSP 2 Score: 36.1946 bits (82), Expect = 5.403e-17 Identity = 17/44 (38.64%), Postives = 24/44 (54.55%), Query Frame = 1
Query: 475 LKWVTFHGLYDVPYLVKIFTHHPLPPHTQALSGVAPLFFQSDFD 606
+ WVTFHG YD YLVK+ T LP + ++F + +D
Sbjct: 156 ISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFPTVYD 199 The following BLAST results are available for this feature:
BLAST of DY260454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260454 ID=DY260454; Name=DY260454; organism=Citrus clementina; type=EST; length=1236bpback to top |