DY260462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.748e-29 Identity = 57/141 (40.43%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G Q+G + W+ EHG+ G+ + + + + N +F+E S ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD +D VR+ ++ C LQGF + +++ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGVYNGSSDLQL--ERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVVDVVRREAEGCDCLQGFQITHSL 139 HSP 2 Score: 30.8018 bits (68), Expect = 1.748e-29 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 + + PSP+VS VVEP N+ S H EH+ Sbjct: 167 YSVVPSPKVSDTVVEPYNATLSVHQLVEHS 196
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB2_EMENI (Tubulin beta-2 chain OS=Emericella nidulans GN=tubC PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.276e-29 Identity = 56/141 (39.72%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G QVG++ W+ EHG+ G+ D+ + + + N +F+E ++VPRAV +DLEP +D +R+G L+ P+ I G+ A NN+A+GHYT G E+VD +D VR+ +++C LQGF V +++ Sbjct: 1 MREIVHLQTGQCGNQVGSAFWQTISGEHGLDASGIYTGDSDLQL--ERMNVYFNEAGGNKYVPRAVLIDLEPGTMDALRSGPNGALYRPDNFIYGQSSAGNNWAKGHYTEGAELVDQVIDVVRREAESCDCLQGFQVTHSL 139 HSP 2 Score: 31.9574 bits (71), Expect = 2.276e-29 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 F + PSP+VS VVEP N+ S H EH+ Sbjct: 167 FSVMPSPKVSDTVVEPYNATLSVHQLVEHS 196
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_VENIN (Tubulin beta chain OS=Venturia inaequalis PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.276e-29 Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G Q+G + W+ EHG+ DG + T + + N +F+E S + VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ ++ C LQGF + +++ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGL--DGSGVYNGTSDLQLERMNVYFNEASGNKFVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSL 139 HSP 2 Score: 29.6462 bits (65), Expect = 2.276e-29 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 F + PSP+VS VVEP N+ S H Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSVH 190
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.276e-29 Identity = 57/141 (40.43%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G Q+G WE+ EHGI DG + + + + + +++E + ++VPRAV +DLEP +D VR+G + LF P+ + G+ A NN+A+GHYT G E+VD LD VRK ++ C LQGF + +++ Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIATDGQYKGTSDLQL--ERISVYYNEVAGNKYVPRAVLIDLEPGTMDSVRSGPFGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSL 139 HSP 2 Score: 29.6462 bits (65), Expect = 2.276e-29 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 F + PSP+VS VVEP N+ S H Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSVH 190
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.276e-29 Identity = 58/141 (41.13%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ I GQ G Q+G + W+ EHG+ +G+ + + + + N +F+E + ++VPRAV VDLEP +D VR G + QLF P+ I G+ A NN+A+GHYT G E+VD LD +R+ ++ C LQGF + +++ Sbjct: 1 MREIVHIQTGQCGNQIGAAFWQTISGEHGLDSNGIYGGSSELQL--ERMNVYFNEANNNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFIFGQSSAGNNWAKGHYTEGAELVDNVLDVIRREAEGCDCLQGFQITHSL 139 HSP 2 Score: 29.6462 bits (65), Expect = 2.276e-29 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 F + PSP+VS VVEP N+ S H Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSVH 190
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_TRIRU (Tubulin beta chain OS=Trichophyton rubrum PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.276e-29 Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G Q+G + W+ EHG+ G + + + + N +F+E S+ ++VPRAV VDLEP +D VR G + QLF P+ ++ G+ A NN+A+GHYT G +VD +D VR+ ++ C LQGF + +++ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTIAGEHGLDGSGHYTGSSDLQL--ERMNVYFNEASSKKYVPRAVLVDLEPAALDAVRAGPFGQLFRPDNVVFGQSGAGNNWAKGHYTEGANLVDQVIDVVRREAEGCDCLQGFQITHSL 139 HSP 2 Score: 31.187 bits (69), Expect = 2.276e-29 Identity = 15/30 (50.00%), Postives = 18/30 (60.00%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 F + PSP VS VVEP N+ S H EH+ Sbjct: 167 FSVVPSPMVSDTVVEPYNATLSIHQLVEHS 196
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 2.276e-29 Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGF 540 MREI+ IGQ G Q+G WE+ EH I G D+ + + + N +++E S GR+VPRAV VDLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D VRK +++C LQGF Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQL--ERINVYYNEASGGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGF 133 HSP 2 Score: 30.0314 bits (66), Expect = 2.276e-29 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 F I PSP+VS VVEP N+ S H Sbjct: 167 FSILPSPKVSDTVVEPYNATLSVH 190
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.276e-29 Identity = 58/141 (41.13%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ I GQ G Q+G+ WE+ E G+ P + P D+ + + + N +++E + GR+VP A+ +DLEP +D VR G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD VRK +++C LQGF + +++ Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEQGVDPPDI-PGDSDLQL--ERINVYYNEATGGRYVP-AILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGPELIDSVLDVVRKEAESCDCLQGFQIAHSL 137 HSP 2 Score: 31.5722 bits (70), Expect = 2.276e-29 Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTHFPPEHTHVCRAIGQ*TYFEL 772 F + PSP+VS VVEP N+ S H E+ IG +++ Sbjct: 165 FSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDI 208
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.962e-29 Identity = 61/141 (43.26%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ I GQ G Q+G WE+ EHGI G + T + D +++E S GR+VPRAV VDLEP V+D ++ G + L+ P+ ++G+ A NN+A+GHYT G E+VD LD VR+ ++ C LQGF V +++ Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAY--NGTSDLQLDRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSL 139 HSP 2 Score: 27.7202 bits (60), Expect = 2.962e-29 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 + + PSP+VS VVEP N S H Sbjct: 167 YSVMPSPKVSDTVVEPYNCTLSVH 190
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_PHANO (Tubulin beta chain OS=Phaeosphaeria nodorum GN=tubA PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.963e-29 Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MREI+ + GQ G Q+G + W+ EHG+ DG + T + + N +F+E S + VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ ++ C LQGF + +++ Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGL--DGSGVYNGTSDLQLERMNVYFNEASGNKFVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSL 139 HSP 2 Score: 29.261 bits (64), Expect = 2.963e-29 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTH 712 F + PSP+VS VVEP N+ S H Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSIH 190 The following BLAST results are available for this feature:
BLAST of DY260462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260462 ID=DY260462; Name=DY260462; organism=Citrus clementina; type=EST; length=1189bpback to top |