DY260462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.313e-19 Identity = 50/142 (35.21%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+ +GQ G Q+G W+ C+EHGI+P+G++ G D + FF + +VPRAV +DLEP VI+ ++ +Y L++PE + K A NN+ RG YT +++ D L+ + + +D L+GF++ +++ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNG--EDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.715e-19 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+I GQ G VG+ W+ CLEHGI DG + T G D + FF ++ R++PRA+ +DLEP V++ +++G Y+ +++PE G++ A NN+ G Y G+ + + D + + +D L+GF+ +++ Sbjct: 3 REIITIQAGQCGNNVGSQFWQQLCLEHGISQDGNLEEFATEG--GDRKDVFFYQSDDTRYIPRAILLDLEPRVLNGIQSGPYKNIYNPENFFIGQQGIGAGNNWGAG-YAAGEVVQEEVFDMIDREADGSDSLEGFMFLHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.240e-19 Identity = 50/142 (35.21%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+ +GQ G Q+G W+ C+EHGI+P+G++ G D + FF + +VPRAV +DLEP VI+ ++ +Y L++PE + K A NN+ RG YT +++ D L+ + + +D L+GF++ +++ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNG--EDRKDVFFYQADDEHYVPRAVLIDLEPRVINCIQKSTYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.990e-19 Identity = 51/142 (35.92%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+I +GQ G Q+G W+ CLEHGI DG++ T G D + FF + +PR++ +DLEP VI+ ++ YR L++ E + + A NN+A G Y G+++VD +D V + +D L+GF++ +++ Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQG--GDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMVDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 6.518e-19 Identity = 49/142 (34.51%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ GQ G QVG+ W+ CLEHGI PDG + T G+ D + FF ++ R++PRA+ +DLEP V++ + + +Y L++PE + + A NN+A G Y ++I + +D + + ++ L+GF + +++ Sbjct: 3 REIITLQAGQCGNQVGSQFWQQLCLEHGICPDGTLEDFATEGL--DRKDVFFYQSDDTRYIPRAILLDLEPRVVNNILSDTYGSLYNPENIFVATDGGGAGNNWAHG-YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 8.512e-19 Identity = 50/142 (35.21%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ CLEHGI DG++ T G D + FF + ++PRA+ +DLEP VI+ ++ G YR L++ E + A NN+A G Y GK + + +D + + +D L+GF++ +++ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQG--GDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 8.512e-19 Identity = 50/142 (35.21%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ CLEHGI DG++ T G D + FF + ++PRA+ +DLEP VI+ ++ G YR L++ E + A NN+A G Y GK + + +D + + +D L+GF++ +++ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQG--GDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 1.112e-18 Identity = 49/141 (34.75%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 142 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 EII++ +GQ G Q+G W+ CLEHGI PDG++ T G D + FF + ++PRAV +DLEP VI+ + T Y +L++ E + K A NN+A G ++ G+++ + D + + +D L+GF++ +++ Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDG--QDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.112e-18 Identity = 51/142 (35.92%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+I +GQ G Q+G W+ CLEHGI DG++ T G D + FF + +PR++ +DLEP VI+ ++ YR L++ E + + A NN+A G Y G++ VD +D V + +D L+GF++ +++ Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQG--GDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.452e-18 Identity = 45/142 (31.69%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REI+++ GQAG Q+G+ W C EHGI +G++ T D + FF + ++PRAV +DLEP V+D +++G Y+ L++PE + A NN+A+G Y G+ + + ++ + + ++ L+GF++ +++ Sbjct: 3 REILTVSAGQAGNQIGSEFWSQLCAEHGISKEGVLEDWATDMT--DRKDVFFYQADDEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKG-YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSI 141 The following BLAST results are available for this feature:
BLAST of DY260462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260462 ID=DY260462; Name=DY260462; organism=Citrus clementina; type=EST; length=1189bpback to top |