DY260462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.896e-18 Identity = 50/143 (34.97%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQ-LISGKEDAANNFARGHYTVGK--EIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++++GQ G Q+G+ ++ C EHGI PDG + ++ I D + FF + R+VPR++ +DLEP V+D +RT +R ++PE +I A N++A G+YT K EI ++ + + ++C L+GF +++ Sbjct: 3 REIITLNVGQCGNQLGSEFFKKICSEHGILPDGSLSTNEFID---DRKDVFFYQADDQRYVPRSINIDLEPRVLDSIRTSEWRNFYNPENFIIPTNNGAGNSWANGYYTTEKMSEIEEI----IDREVEHCDSLEGFFFCHSI 138
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.164e-18 Identity = 47/142 (33.10%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REI+++ +GQ G Q+G W+ C EHGI +G++ T G D + FF + ++PRA+ VDLEP VI+ + Y L++PE + K+ A NN+A+G Y+ G+ I + ++ + + ++ L+GF+V +++ Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEG--GDRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSI 141 HSP 2 Score: 20.7866 bits (42), Expect = 2.164e-18 Identity = 9/26 (34.62%), Postives = 15/26 (57.69%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSV 700 KK + ++P+ Q VV+P NS+ Sbjct: 163 KKLIQTYSVFPNAQEGDVVVQPYNSL 188
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.235e-18 Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGK--EDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+ +GQ G Q+G W+ C+EHGI P+G++ G D + FF + +VPRAV +DLEP VI +++ Y L++PE K + A NN+A+G Y G + + ++ + + +D L+GF++ +++ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGISPEGILEEYALDG--EDRKDVFFYQADDEHYVPRAVLIDLEPGVIKQIQNSPYSNLYNPENFFVSKTMDGAGNNWAKG-YCEGAKYEEEIIEMIDREADGSDSLEGFVLTHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.225e-18 Identity = 48/142 (33.80%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ CLEHGI DG++ T G D + FF + ++PRA+ +DLEP VI+ ++ YR L++ E + A NN+A G Y G+++ + +D + + +D L+GF++ +++ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQG--GDRKDVFFYQADDEHYIPRALLIDLEPRVINSIQNSEYRNLYNHENVFVADHGGGAGNNWASG-YHQGEQVEEDIMDMIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.225e-18 Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G+ W+ C EHGI+ G + G+ D + FF ++ +VPRA+ +DLEP VID ++T Y L++ E + ++ A NN+A G Y G+ D D + + +D L+GFL+ +++ Sbjct: 3 REIITLQVGQCGNQIGSEFWKQLCKEHGINAAGYLEEFAKPGI--DRKDVFFYQSDDDHYVPRALLLDLEPRVIDSIKTSEYSGLYNQENIFVAEKGTGAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG2_MOUSE (Tubulin gamma-2 chain OS=Mus musculus GN=Tubg2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.225e-18 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ C EHGI P+G++ T G D + FF + ++PRAV +DLEP VI + SY +L++PE + + A NN+ RG ++ G++I + D + + +D L+GF++ +++ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWGRG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.518e-18 Identity = 47/142 (33.10%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII+ +GQ G Q+G W+ C+EHGI+P+G++ G D + FF + +VPRAV +DLEP VI+ ++ Y L++PE + K A NN+ RG Y +++ + ++ + + +D L+GF++ +++ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEEYAQNG--EDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSPYASLYNPENIFISKHGGGAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.206e-18 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ C EHGI P+G++ T G D + FF + ++PRAV +DLEP VI + SY +L++PE + + A NN+A G ++ G++I + D + + +D L+GF++ +++ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.206e-18 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ C EHGI P+G++ T G D + FF + ++PRAV +DLEP VI + SY +L++PE + + A NN+A G ++ G++I + D + + +D L+GF++ +++ Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.229e-17 Identity = 48/142 (33.80%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 139 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 REII++ +GQ G Q+G W+ CLEHGI +GM+ T G D + FF + ++PRA+ +DLEP VI+ ++ YR L++ E + A NN+A G Y G+++ + +D + + +D L+GF++ +++ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKEGMLEDFATQG--GDRKDVFFYQADDEHYIPRALLLDLEPRVINGIQNSEYRNLYNHENVFVADHGGGAGNNWASG-YHQGEQVEEDIMDMIDREADGSDSLEGFVLCHSI 141 The following BLAST results are available for this feature:
BLAST of DY260462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260462 ID=DY260462; Name=DY260462; organism=Citrus clementina; type=EST; length=1189bpback to top |