DY260462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 9.739e-15 Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 MRE++++ +GQ G Q+G W+ C EHGI G++ +G D + FF + VPRA+ VDLEP VI + + F E + E A NN+ G Y VGK + + +D +++ ++ C L+ FL+ +++ Sbjct: 1 MREVVTLQVGQCGNQMGAEFWKTLCKEHGISMCGVLQDSRDLG---DRKDVFFYQADDNVFVPRAILVDLEPRVISQAPS-----FFSQESIFLSNEGGGAGNNWGHG-YCVGKAMGNDVIDMIQREAEGCDALETFLLLHSI 134
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.245e-14 Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 142 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMP-SDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 EII+I +GQ G VG W EHGI DG +D+ + D N FF + + R+VPRA+ +DLEP + +V++ S+ LF+P E A N+++ G Y G + D +D + + D+ +GF + ++V Sbjct: 4 EIITIQVGQCGNHVGKYFWNQLLKEHGIDKDGYSKYNDDLTHIREDDTNPFFKQITNNRYVPRAIMIDLEPAAVTDVQS-SFNDLFNPRNTWVSSEGLGAGNSWSTG-YDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSV 143
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.751e-13 Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 367 VRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGF 540 VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C LQGF Sbjct: 2 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 59 HSP 2 Score: 30.8018 bits (68), Expect = 3.751e-13 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 641 FPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 F + PSP+VS VVEP N+ S H E+T Sbjct: 93 FSVVPSPKVSDTVVEPYNATLSVHQLVENT 122
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 7.717e-12 Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 1 Query: 142 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQ--LISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 EII++ GQ G VG W EH I DG+ ++ D FF E S + PRA+ +D EP+VI +V ++R F P + S A N++A G Y +G D L+++ K D+ +GF + ++V Sbjct: 4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTERDDDTKPFFRENSRNKFTPRAIMMDSEPSVIADVE-NTFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSV 142
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.316e-11 Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 142 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDG--MMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKED--AANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 EIISI +GQ G QVG W EHGI DG + P D + V D N FF + R PRA+ DLEP+ I +V+ + F+ + KE+ A N ++ G Y G E D ++ + K D +GF + ++V Sbjct: 4 EIISIQVGQCGNQVGKQFWGQLAREHGIGVDGQSLHPEDANV-VREDDTNVFFRQNDHNRFTPRALLYDLEPSAIGDVQ-NCFPGFFNERNVWISKEELGAGNTWSIG-YDYGLEKQDEFMNMIDKEIDATGNFEGFQLIHSV 143
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11 Identity = 44/155 (28.39%), Postives = 75/155 (48.39%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSET-----------SAGRHVP---RAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 M + + + +GQ G Q+G W+L EH + N G+ +A ++FF S G+ RAV +D+E V++E+ G R +F +QLI+ + NN+A GH G D L++ RK +++C LQ F + +++ Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSM 147
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11 Identity = 41/141 (29.08%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 145 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVID-EVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 ++++H+GQ G Q+ + W+ EHGI+ G ++ + +D + F + +VPRAV VDLEP VI+ +++ ++ LF+ + + A NN+A G Y G+E+ + +D + + ++N L G L ++V Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSV 143
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11 Identity = 45/155 (29.03%), Postives = 75/155 (48.39%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSET-----------SAGRHVP---RAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAV 558 M + + + +GQ G Q+G W+L EH + N G+ DA ++FF S GR RAV +D+E V++E+ G R +F +QLI+ + NN+A GH G + L+++RK ++ C LQ F + +++ Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSM 147 The following BLAST results are available for this feature:
BLAST of DY260462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260462 ID=DY260462; Name=DY260462; organism=Citrus clementina; type=EST; length=1189bpback to top |