DY260462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_CRIGR (Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
BLAST of DY260462 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.015e-77 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 136 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKEVK 633 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGK+ K Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 HSP 2 Score: 51.6026 bits (122), Expect = 3.015e-77 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 623 KKSKLGFPIYPSPQVSTAVVEP*NSVPSTHFPPEHT 730 KKSKL F IYP+PQVSTAVVEP NS+ +TH EH+ Sbjct: 163 KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198 The following BLAST results are available for this feature:
BLAST of DY260462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260462 ID=DY260462; Name=DY260462; organism=Citrus clementina; type=EST; length=1189bpback to top |