DY260463

Overview
NameDY260463
Unique NameDY260463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1268
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_ALCBS (Chaperone protein htpG OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.649e-17
Identity = 44/125 (35.20%), Postives = 76/125 (60.80%), Query Frame = 2
Query:    2 IELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL-TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA 373
            +++ ++++ + + Y KF+  F   +K G+ ED  N+  +A LLR+ ++K+ D + TSL  Y+      Q+ IYY+  ++  A   SP LE  +KKG EVL + D +DE+ VG L+ ++  KLV+A
Sbjct:  356 LQMLKKLSNDDKQYAKFWAQFGSVIKEGVAEDRDNQQSIAALLRFATSKTPDSVSTSLDQYLESKPADQDCIYYLLADTPSAARQSPHLEVFRKKGIEVLLLSDPVDEWMVGYLESYKEVKLVNA 480          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.130e-16
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2
Query:   26 ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 376
            E  E+Y KF+E+F   LK GI+ED   + ++A LLR+ S+  G   TSL +YV RMK  Q  IYY+  +  +A++NS  LE  + +  EVL + D +D +   QL +FE K L S T
Sbjct:  363 EKAEEYQKFFENFGPVLKEGIYEDFERRAEIAPLLRFRSSTEGG-WTSLPEYVARMKPEQEAIYYLVADDVEALKNSAQLEGFRARRVEVLLLSDHVDAFWPEQLGKFEDKPLRSVT 478          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.130e-16
Identity = 48/124 (38.71%), Postives = 76/124 (61.29%), Query Frame = 2
Query:   14 QEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVS 370
            +++++++E Y +F   + + LK G+++D TNK  + ELLRY S+K+   ++TSL+ Y  R    Q  IYYI GE++K + NSP LE  KK   EVL +    +D I   A+G  KE+E K + +
Sbjct:  374 KKLSKDEEKYAEFVAQYIRPLKEGVYQDYTNKEAILELLRYKSSKTEAGKMTSLEAYKERANSEQKAIYYIVGENEKVLRNSPLLESYKKNDIEVLILDDKEIDEIITPAIGAFKEWEFKDITA 497          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCR (Chaperone protein htpG OS=Ehrlichia chaffeensis (strain Arkansas) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.475e-16
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 2
Query:    5 ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 370
            EL ++   + +DY KF+E+F   LK G+ E      + +L    R++ST S D L SL+DY+ RMK GQ++IYY+TG    +V+ SP LE    +G EV+ +VD +D++    + +++   L S
Sbjct:  357 ELKKKAESDIKDYKKFWENFGSVLKEGLCESMNTEFREELMSACRFYSTYSDDSLISLEDYIERMKAGQDNIYYLTGNDLDSVKKSPQLEGFISRGIEVILLVDPVDDFWTNVVTDYQKVPLKS 480          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.516e-16
Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = 2
Query:    8 LFQEIAENKED-YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 370
            + + +++N  D Y  F++ F   LK G  ED  N   + +L R+ ST   S ++  SL+DYV RM+ GQN I+YIT ++  + +N+P LEKLK+K  EVL + D IDE+ +  + EF+  K  S
Sbjct:  367 MLENLSKNHPDEYKLFWKEFGLILKEGPSEDIKNYENVIKLFRFSSTYINSENQEVSLEDYVKRMQSGQNKIFYITSDNYLSAKNNPHLEKLKEKKIEVLLLFDRIDEWMMNYMTEFKKIKFQS 490          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.516e-16
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 2
Query:    2 IELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 376
            I   +++A+ + E Y  F+++F   LK GI+ED   + +L  L R+H++ S +   SL +YV   KEGQ+ IYY+ G S   ++ SP LE  + +G EVL + D++D + V    EFEGK   S T
Sbjct:  357 ITAIEKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSIT 482          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.287e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2
Query:   26 ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 370
            E  E +  FY++F   +K+G++ D TN+ KL ELLR+ STK+ + E  +L++YV RM   Q +IYY +G ++  +   P +E  ++ G EVL + D +D + +  + EF+ K L S
Sbjct:  366 EQPEKFKTFYKAFGPIIKIGLNTDFTNREKLIELLRFESTKTEEGEFVTLREYVERMGSEQKEIYYHSGNNRAQLLAHPNIEYFREHGIEVLLLSDPVDMFVIPSIHEFDKKPLKS 481          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.322e-16
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   14 QEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 376
            +++AE+  E + K +E+F   +K GI+ED   + +L  L R+ +T   D+  +L DYV  MKEGQ+ IYY+TG++   ++ SP LE  + +G EVL +   +D + V    +F+GK   S T
Sbjct:  360 EKLAESDSEAFAKIWENFGSVIKEGIYEDFERRGQLLALSRFRTTADDDKPRALSDYVKEMKEGQSAIYYLTGDNLAQLKASPQLEGFRARGIEVLLLTCPVDSFWVTTAPDFDGKPFKSIT 481          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.563e-16
Identity = 57/208 (27.40%), Postives = 94/208 (45.19%), Query Frame = 2
Query:    5 ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMA 616
            EL ++  E  E+YNKF+ +F   LK G+ E +T+  KL E+  + S    +++ S+ +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K++LG               P CL   +      MER +  Q    N+ A
Sbjct:  351 ELRKKKEELPEEYNKFWTNFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISIDEYIANFKEGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFTDTVDDFWVNVNSEYKGYAIKSATRSDIDVEQTTSQPKDKNTDSKKSDNEYKLLTDYFKEILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFLIEQKQIANASA 557          
BLAST of DY260463 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.563e-16
Identity = 56/200 (28.00%), Postives = 91/200 (45.50%), Query Frame = 2
Query:    5 ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 592
            EL ++  E+ E+YNKF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  351 ELKKKKEESPEEYNKFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEEKNADSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549          
The following BLAST results are available for this feature:
BLAST of DY260463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HTPG_ALCBS8.649e-1735.20Chaperone protein htpG OS=Alcanivorax borkumensis ... [more]
HTPG_METC41.130e-1641.88Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_ARCB41.130e-1638.71Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_EHRCR1.475e-1637.10Chaperone protein htpG OS=Ehrlichia chaffeensis (s... [more]
HTPG_WIGBR2.516e-1639.52Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_RHIEC2.516e-1638.10Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_CHLCH3.287e-1637.07Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_RHIME7.322e-1636.89Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_RICPR9.563e-1627.40Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]
HTPG_RICFE9.563e-1628.00Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YJ03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260463 ID=DY260463; Name=DY260463; organism=Citrus clementina; type=EST; length=1268bp
CATTGAGCTCTTCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGT
TTTATGAGTCATTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCC
ACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAG
TGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAAGGAAG
GCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAG
AACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTA
CATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTG
AGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTGACGAG
AGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTTGAGGG
TCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTG
TGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAG
TATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAG
AGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAAACCATGGAGATCC
ATCCGGAAGAACCCATCATGGAGGAACTCAGGAAGAGGGCTGATGCTGAC
CAGAATGACACGTTCGGTGAAGGGACCTTGTCCCTCCCGCTTCTTGAAAC
TGCCCTCCCCCCCTTCTGGTTTCCGCCCTTGGATGACCCCAACCCCTTTT
CCGCCACCCAAACCCTCGGGAAGTTGAAACCCGGGGCCCAGCCCTCCAGG
AGGGAGCCTGGGGATACCCGCAGCCCGACCTGCCCCCGTTCGAGGACACC
GCCCCCACATCCCCGACCGCCCCCCAGACGGACGCAATTTCATATCACAA
GCCCCCAGAGATCCTGGCCCATCACGCCCCCTTTTTTCCGGCAAAACCTT
TTAAAACCCGAGAGGATGTTCATATGATCCCTCCGCGCTTCCCGGTCGGG
TCGCATGCAGCGAGGGCCCGCGACCCCCCGACGACCCACCGCCACCGCTC
CCCACCCGCACATGGGAACGCGACCGCTTCACCCCATGCACTCCCACCCT
CCACGCACCCCACCACGCCCTGACCGAGGCTCCCTGCTCCGCCCTACCTC
GATCAAACTCACCCACCAGCCATCATCTACCTACCCATCTCACACGTACG
CGACCCATACGCCAGTTC
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