DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.261e-24 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 9.261e-24 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK NVE+AF +A K Sbjct: 148 LETSAKNATNVEQAFMTMAAEIKK 171
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.261e-24 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 9.261e-24 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK NVE+AF +A K Sbjct: 148 LETSAKNATNVEQAFMTMAAEIKK 171
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.888e-24 Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQERF+SL ++ R + V+VYDV S +SF N W +E + + V++GNK D+ + E +A+ A + N+ + ET K Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERG----SDVIVVLVGNKTDLVDKRQVSIEEAEAK---ARELNVMFIETSAK 154
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 108.612 bits (270), Expect = 1.202e-23 Identity = 55/150 (36.67%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++++GDSGVGK+++++++ +F + K+TIG +F T+ Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK D++ + R V+E+ ++ A K + + ET Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD----SNIVIMMAGNKSDLN--HLRSVAEEDGQS-LAEKEGLSFLET 154 HSP 2 Score: 23.483 bits (49), Expect = 1.202e-23 Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 551 KEIFLTLRPSAKEGINVEEAFQCI 622 KE L SA E NVE+AFQ I Sbjct: 146 KEGLSFLETSALEATNVEKAFQTI 169
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.205e-23 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W +E AS +N +++GNK D+ +VV A+ + G IP+ ET K Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDFTTAKEYADQLG-IPFLETSAK 156 HSP 2 Score: 22.3274 bits (46), Expect = 1.205e-23 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIA 625 L SAK NVE+AF +A Sbjct: 151 LETSAKNATNVEQAFMTMA 169
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.205e-23 Identity = 56/153 (36.60%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G +P+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-VPFLETSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 1.205e-23 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK NVE+AF +A K Sbjct: 148 LETSAKNATNVEQAFMTMAAEIKK 171
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.205e-23 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 1.205e-23 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK NVE+AF +A K Sbjct: 148 LETSAKNATNVEQAFMTMAAEIKK 171
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.205e-23 Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + LQIWDTAGQERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++LGNK D++ + RVV + K A + I +FET K Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLGNKCDME--DKRVVLKSKGEQ-IAREHAIRFFETSAK 154 HSP 2 Score: 23.8682 bits (50), Expect = 1.205e-23 Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALK 640 SAK IN+E+AF +A++ L+ Sbjct: 152 SAKANINIEKAFLTLAEDILQ 172
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.291e-23 Identity = 58/153 (37.91%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF + ++ + + LQ+WDTAGQERF+++ A+YRGA VL+YDV +SF+N+ NW + A+ ++ ++GNK D D N +V E+ A+K N+P+ E K Sbjct: 14 IMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHAN----EDAQIFLVGNKCD-DEVNRQVSKEQGQE--LAAKLNVPFLEASAK 159
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.564e-23 Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K+I++GDSG GK+SL+ ++ + +S Y +TIG DF K V+ ++ LQIWDTAGQERF+++ +YRGA + VYDV + SFD++ E +L N +++GNKID+ +SRVV +A+ A + N+ Y E K Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHIT---ETWLQDIDKYATSNVCKLLIGNKIDL--VDSRVVLADEAK-HVAEQNNMNYIEASAK 153 HSP 2 Score: 23.0978 bits (48), Expect = 1.564e-23 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 + SAK NVE+AF IAK ALK Sbjct: 148 IEASAKTDSNVEKAFTTIAK-ALK 170 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |