DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.036e-23 Identity = 56/150 (37.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ET Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIET 153 HSP 2 Score: 20.7866 bits (42), Expect = 2.036e-23 Identity = 10/31 (32.26%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEEEQI 661 + SA + NVE AFQ I + ++Q+ Sbjct: 151 IETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.036e-23 Identity = 56/150 (37.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ET Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIET 153 HSP 2 Score: 20.7866 bits (42), Expect = 2.036e-23 Identity = 10/31 (32.26%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEEEQI 661 + SA + NVE AFQ I + ++Q+ Sbjct: 151 IETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.036e-23 Identity = 56/150 (37.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ET Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIET 153 HSP 2 Score: 20.7866 bits (42), Expect = 2.036e-23 Identity = 10/31 (32.26%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEEEQI 661 + SA + NVE AFQ I + ++Q+ Sbjct: 151 IETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.041e-23 Identity = 58/153 (37.91%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E A +N +++GNK D+ RVVS A+ + S G I + ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYAC----ENVNKLLVGNKSDLTA--KRVVSTDAAKEFAESLG-IEFLETSAK 153 HSP 2 Score: 22.3274 bits (46), Expect = 2.041e-23 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK NVE+AF +A K Sbjct: 148 LETSAKNAANVEKAFMMMAAQIKK 171
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.203e-23 Identity = 56/150 (37.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ET Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIET 153
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 2.655e-23 Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK D+ +R + + A+A+ A + IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYAS----DNVNKLLVGNKSDLT--ENRAIPYETAKAF-ADEIGIPFMETSAK 153 HSP 2 Score: 21.557 bits (44), Expect = 2.655e-23 Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIA 625 + SAK+ NVE+AF ++ Sbjct: 148 METSAKDATNVEQAFMAMS 166
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.655e-23 Identity = 57/153 (37.25%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDS VGK+ L+ ++ + + + Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYD M+SF+N+ W E A+ ++ +++GNK D+ S+VVS + RA A + IP+ ET K Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYAN----ESVCKLLIGNKNDM--VESKVVSTETGRA-LADELGIPFLETSAK 153 HSP 2 Score: 25.409 bits (54), Expect = 2.655e-23 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIA 625 L SAK+ INVE+AF IA Sbjct: 148 LETSAKDSINVEQAFLTIA 166
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.659e-23 Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 130 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNI 561 LKV +LGD+GVGK+S++ ++V F + TIGA F+TK V + L IWDTAGQERF SL +YRG+ V+VYD+ SF L W +E P+N + GNK D+ + R V K A+ + S G I Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKEL----KEHGPENIVMAIAGNKCDL--SDIREVPLKDAKEYAESIGAI 143 HSP 2 Score: 24.6386 bits (52), Expect = 2.659e-23 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 563 LTLRPSAKEGINVEEAFQCIAK 628 + + SAK IN+EE FQ I++ Sbjct: 143 IVVETSAKNAINIEELFQGISR 164
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.448e-23 Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + +F NW +E QASP N + GNK D+ R V + A+ + A ++ + ET K Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASP----NIVIALAGNKADL--ATKRAVDFQDAQTY-ADDNSLLFMETSAK 166 HSP 2 Score: 24.2534 bits (51), Expect = 3.448e-23 Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2 Query: 563 LTLRPSAKEGINVEEAFQCIAKNALKS 643 L + SAK +NV E F IAK K+ Sbjct: 159 LFMETSAKTAMNVNEIFMAIAKKLPKN 185
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.757e-23 Identity = 58/154 (37.66%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 +++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V + LQ+WDTAGQERF+++ A+YRGA +LVYDV ++F N+ W + A+ D +++GNK D+D +RVV+ ++ A G +P+ E+ K Sbjct: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHAN----DEAQLLLVGNKSDMD---TRVVTYEQGEALAKELG-LPFIESSAK 164 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |