DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB22A_CANFA (Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.426e-22 Identity = 55/140 (39.29%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 130 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS 549 LKV +LGD+GVGK+S++ ++V F TIGA F+TK VQ+++ L IWDTAGQE F++L +YRG+ ++VYD+ ++F L NW +E P N + GNK D+ + R V E+ A+ + S Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKEL----RQHGPPNIVVAIAGNKCDLI--DVREVMERDAKDYADS 139
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.426e-22 Identity = 48/122 (39.34%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 492 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ ++ + ++ QIWDTAGQER++++ A+YRGA +LVYDV +F+N++ W +E P N +++GNK D+ Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDP----NIVVMLVGNKSDL 130
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.149e-22 Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFS-NQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 K I+LGDSGVGKTS + +Y +F + AT+G K V + LQIWDTAGQERF+S+ A+YR A +L+YDV + ++DN+ W E A ++ V++GNK D G +V E R + N+P+ ET K Sbjct: 192 KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ----EDVVIVLIGNKADCSGSERQVKREDGER--LGREHNVPFMETSAK 337 HSP 2 Score: 25.0238 bits (53), Expect = 6.149e-22 Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEE 652 + SAK G+NVE +F +A+ G E Sbjct: 332 METSAKTGLNVELSFTAVARQLKSRGYE 359
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.256e-22 Identity = 58/153 (37.91%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT ++ ++ + F+ + +TI DF K V+ + + LQIWDTAGQERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++L NK D+D + RVV + K A + I +FET K Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHAN----EDVERMLLRNKCDMD--HKRVVPKGKGEQ-IAREHRIRFFETSAK 154 HSP 2 Score: 22.3274 bits (46), Expect = 6.256e-22 Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALK 640 SAK IN+E+AF + ++ L+ Sbjct: 152 SAKANINIEKAFLTLPEDILR 172
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.086e-22 Identity = 47/122 (38.52%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 492 L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + ++++ QIWDTAGQER++++ A+YRGA +LVYDV +++N+ W +E P N +++GNK D+ Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDP----NIVVMLIGNKSDL 130
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.086e-22 Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 112 SRRRTLL---KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYF 570 SRRR KV++LG+ VGKTSL+ +Y KF+++++ T+ A F+ K + + L IWDTAGQER+ +LG +YR + ++VYD+ SF NW +E D ++GNKID+D R VSEK A + S G Y+ Sbjct: 8 SRRRQATVKAKVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLG----DKVTLCIVGNKIDLD--RQRTVSEKDALEYAESVGAKHYY 157
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.119e-22 Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + V + + LQIWDTAGQE F+S+ ++YRGA +LVYD+ ++F++L +W E+ A N +++GNK D++ + R V ++ A+ G I + ET K Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED----ARQHSSSNMVIMLIGNKSDLE--SRRDVKREEGEAFAREHGLI-FMETSAK 151 HSP 2 Score: 21.557 bits (44), Expect = 8.119e-22 Identity = 11/20 (55.00%), Postives = 12/20 (60.00%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAK 628 + SAK NVEEAF AK Sbjct: 146 METSAKTACNVEEAFINTAK 165
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 9.255e-22 Identity = 58/156 (37.18%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV--DGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 T +K+++LG++ VGK+S++ ++V+ F+ + TIGA FLT+ V + +IWDTAGQERF SL +YR A ++VYDV +SF +W +E QAS + ++GNKID+ +GG +V E+ + A + + +FET K Sbjct: 6 TSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQAS----KDIIIALVGNKIDMLQEGGERKVAREEGEK--LAEEKGLLFFETSAK 155
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB23_MOUSE (Ras-related protein Rab-23 OS=Mus musculus GN=Rab23 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 9.255e-22 Identity = 46/121 (38.02%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 130 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 492 +K++++G+ VGK+S++ +Y F+ YK TIG DFL +++Q D L +WDTAGQE F ++ A+YRGA CVLV+ +SF+ +++WRE+ + + + P ++ NKID+ Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-----DIPTALVQNKIDL 125
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: DJC27_CHICK (DnaJ homolog subfamily C member 27 OS=Gallus gallus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 9.255e-22 Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 97 PRTMPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP-SDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 P+ +R+ +KVI +G++ VGK+ ++ +Y K+F +Y ATIG D+ +VQ DR + I+D AG F + FY+ +LVYDV +SFD L+ W E + P + DN FVV NKID R V E + R W S+G + YFET Sbjct: 6 PKRKEARKSLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFDALDAWLAEMKQELGPHGNMDNIVFVVCANKIDCT--KHRSVDESEGRLWAESRGFL-YFET 163 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |