DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.195e-35 Identity = 74/160 (46.25%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETLCK 585 ++ R ++KV+I+G+ VGKTS++ +YV+K+F K TIG DF V + + TLQ+WDT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++LGNKID +RVV+EK A WC GN+ YF+T K Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 3.195e-35 Identity = 9/28 (32.14%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALKSGEEEQI 661 SAK+ IN+E+ F+ I+ + +I Sbjct: 151 SAKDNINIEQVFKHISNQCENQPQSNEI 178
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB7B_MOUSE (Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.623e-34 Identity = 78/196 (39.80%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRRH*CGRSFPVHS*KCFEEWGGGTDTPCRTPLMLEP 693 M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQIWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P VVLGNKID++ R VS++ WC K ++PYFE K ++F V + + + G + + L P Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPMVVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRYQGTAENHLIDSIKLSP 191
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.005e-33 Identity = 73/160 (45.62%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQIWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P V+LGNKID+ R V ++ A+ WC K +IPYFE K Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPMVLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAK 155
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.612e-27 Identity = 62/153 (40.52%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAGQERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+D+ + RVVS + +A A + ++ET K Sbjct: 13 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNKLDL-AEDKRVVSIARGQA-LADEFGFRFYETSAK 159 HSP 2 Score: 27.7202 bits (60), Expect = 2.612e-27 Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALKSGEEE 655 SAK+ ++VEEAF +AK+ L E E Sbjct: 157 SAKDNVHVEEAFIAVAKDVLARMEGE 182
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.513e-27 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ +V+ E+ + A + I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDME-AKRKVLKEQADK--LAREHGIRFFETSAK 153 HSP 2 Score: 25.7942 bits (55), Expect = 7.513e-27 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKN-ALKSG 646 SAK +NV+EAF +A++ LKSG Sbjct: 151 SAKSSMNVDEAFNSLARDILLKSG 174
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.781e-27 Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V +++A G I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAK 153 HSP 2 Score: 25.7942 bits (55), Expect = 9.781e-27 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKN-ALKSG 646 SAK +NV+EAF +A++ LKSG Sbjct: 151 SAKSSMNVDEAFSSLARDILLKSG 174
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.781e-27 Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V +++A G I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAK 153 HSP 2 Score: 25.7942 bits (55), Expect = 9.781e-27 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKN-ALKSG 646 SAK +NV+EAF +A++ LKSG Sbjct: 151 SAKSSMNVDEAFSSLARDILLKSG 174
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 2.154e-26 Identity = 60/150 (40.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK D+ + R VSE + +A A K + + ET Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKSDLI--HLRAVSEDEGKA-LAEKEGLFFLET 154 HSP 2 Score: 27.7202 bits (60), Expect = 2.154e-26 Identity = 14/24 (58.33%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 551 KEIFLTLRPSAKEGINVEEAFQCI 622 KE L SA E +NVEEAFQ I Sbjct: 146 KEGLFFLETSAMEAVNVEEAFQTI 169
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.808e-26 Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQREQAER-LAREHRIRFFETSAK 153 HSP 2 Score: 25.409 bits (54), Expect = 2.808e-26 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNAL 637 SAK +NV+EAF +A++ L Sbjct: 151 SAKSSVNVDEAFSSLARDIL 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.761e-26 Identity = 62/153 (40.52%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRQVQREQAEK-LAREHRIRFFETSAK 153 HSP 2 Score: 25.409 bits (54), Expect = 4.761e-26 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNAL 637 SAK +NV+EAF +A++ L Sbjct: 151 SAKSSVNVDEAFSSLARDIL 170 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |