DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.367e-25 Identity = 61/153 (39.87%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K I++GDS VGK++L+ Q+V+K+F+ TIG +F ++ + D+ LQIWDTAGQE+F+S+ A+YRGA C ++VYD+ SF++LN+W L + V++GNK D++ +R VS +A+ + A K + +FET K Sbjct: 24 LFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSW----LTDCRKFSSCDVTTVLIGNKADLEA--NRQVSTSEAKEF-AEKNGLMFFETSAK 169 HSP 2 Score: 23.0978 bits (48), Expect = 1.367e-25 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALKSGE 649 SAK +NV+EAF+ + LK E Sbjct: 167 SAKTALNVDEAFEKSTEQILKKLE 190
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.775e-25 Identity = 65/163 (39.88%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 109 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK D+D + R V K +A A + I +FET K Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAK 161 HSP 2 Score: 22.7126 bits (47), Expect = 1.775e-25 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKN 631 SAK +NVEE F IA++ Sbjct: 159 SAKTNLNVEEVFFSIARD 176
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27A_PIG (Ras-related protein Rab-27A OS=Sus scrofa GN=RAB27A PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.802e-25 Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + RVV E++AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEEARG-LAEKYGIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.315e-25 Identity = 60/153 (39.22%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK D++ + R V K A+ + A + NIP ET K Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKCDLN--SKRAVDFKIAKKF-ADELNIPIMETSAK 178 HSP 2 Score: 21.1718 bits (43), Expect = 2.315e-25 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKS 643 + SAKE ++EAF +A + KS Sbjct: 173 METSAKESTAIDEAFIKLASDIKKS 197
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.354e-25 Identity = 60/161 (37.27%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 121 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS------KGNIPYFETLCK 585 +T+LK+I LGDS VGKTSL YVN ++ +IG D+ KE++ E++ L +WDT GQERFQ+ ++RGA+C L +D+++ +SF NL W +E + N PFV++G K D+ + +S+ + WC + + YFET K Sbjct: 5 KTMLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCY----GNIPFVLVGTKSDIP-RTDKSISKARIEQWCKNIEDQGIIDKVHYFETSAK 160
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 3.011e-25 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDS VGK+ + ++ + + + Y +TIG DF + V+ E + LQIWDTAGQERF+++ ++YRGA ++VYD+ M+SF+N+ W +E A+ D+ +++GNK D+ +R V A+A+ G IP+ ET K Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYAN----DSVRKLLVGNKCDL--AENRAVDTSVAQAYAQEVG-IPFLETSAK 153 HSP 2 Score: 27.335 bits (59), Expect = 3.011e-25 Identity = 16/33 (48.48%), Postives = 18/33 (54.55%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEEEQIHL 667 L SAKE INVEEAF ++ KS Q L Sbjct: 148 LETSAKESINVEEAFLAMSAAIKKSKAGSQAAL 180
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27A_CANFA (Ras-related protein Rab-27A OS=Canis familiaris GN=RAB27A PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.074e-25 Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + RVV E+ AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEDARG-LAEKYGIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.918e-25 Identity = 62/153 (40.52%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLETSAK 153 HSP 2 Score: 24.2534 bits (51), Expect = 3.918e-25 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK NVEEAF +A++ + Sbjct: 148 LETSAKSSTNVEEAFFTLARDIM 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.918e-25 Identity = 62/153 (40.52%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLETSAK 153 HSP 2 Score: 24.2534 bits (51), Expect = 3.918e-25 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK NVEEAF +A++ + Sbjct: 148 LETSAKSSTNVEEAFFTLARDIM 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.918e-25 Identity = 62/153 (40.52%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLETSAK 153 HSP 2 Score: 24.2534 bits (51), Expect = 3.918e-25 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK NVEEAF +A++ + Sbjct: 148 LETSAKSSTNVEEAFFTLARDIM 170 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |