DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 3.918e-25 Identity = 62/153 (40.52%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLETSAK 153 HSP 2 Score: 24.2534 bits (51), Expect = 3.918e-25 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK NVEEAF +A++ + Sbjct: 148 LETSAKSSANVEEAFFTLARDIM 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.920e-25 Identity = 60/153 (39.22%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + V+ + ++ LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK D+ G +VV + A+A+ A + IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYAS----ENVNKLLVGNKSDLTG--KKVVDYQAAKAF-ADEIGIPFLETSAK 153 HSP 2 Score: 22.7126 bits (47), Expect = 3.920e-25 Identity = 13/28 (46.43%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIA---KNALKS 643 L SAK NVE+AF +A KN + S Sbjct: 148 LETSAKNATNVEQAFMTMAAEIKNRMAS 175
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RABO_DICDI (Ras-related protein RabO OS=Dictyostelium discoideum GN=rabO PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.091e-25 Identity = 58/160 (36.25%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS-------KGNIPYFETLCK 585 L++V++LGD VGKT+ + K+F IG DF K + +++ LQ+WDT GQERF+++ +++R CC+L + V+ KSF+N++ W + + D N+P V++GNKID+ V+++K A WC + K +IPYFET K Sbjct: 8 LIRVVLLGDYCVGKTTTGFVFDGKQFDFSRNCNIGVDFFVKHIVVDNQCVRLQVWDTGGQERFKTITRSYFRNTSCCLLFFSVDDQKSFENIDMW---YSLAFEKYDLLNYPVVLVGNKIDLP-QEKHVITKKMAEEWCKNQQTKLNLKFSIPYFETSAK 163 HSP 2 Score: 21.9422 bits (45), Expect = 5.091e-25 Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKNALKS 643 SAK IN+ E F A+ LK+ Sbjct: 161 SAKNNININEIFYSAAELGLKN 182
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.093e-25 Identity = 65/163 (39.88%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 109 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN +++GNK D+D + R V K +A A + I +FET K Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAK 161 HSP 2 Score: 21.1718 bits (43), Expect = 5.093e-25 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 578 SAKEGINVEEAFQCIAKN 631 SAK +NVEE F I ++ Sbjct: 159 SAKTNLNVEEVFFSIGRD 176
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.096e-25 Identity = 57/150 (38.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK D+ + R VSE+ +A A K + + ET Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHAD----SNIVIMMAGNKSDLK--HLRAVSEEDGQA-LAEKEGLSFLET 154 HSP 2 Score: 24.6386 bits (52), Expect = 5.096e-25 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 551 KEIFLTLRPSAKEGINVEEAFQCI 622 KE L SA E +N+E+AFQ I Sbjct: 146 KEGLSFLETSALEAVNIEKAFQTI 169
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.098e-25 Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + V+ + + LQIWDTAGQERF+++ A+YRGA + VYD+ + KSFDN+ NW AS SD + ++LGNK D++ R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--EKRQVSKERGEKLAIDYG-IKFLETSAK 153 HSP 2 Score: 26.1794 bits (56), Expect = 5.098e-25 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK INVEEAF +A++ + Sbjct: 148 LETSAKSSINVEEAFITLARDIM 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 5.243e-25 Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 130 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD----NFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 LK+I++GD VGKTS++++ + KF+ +YK+TIGADFL+K D + +Q+WDTAGQE++ L AF+R +D +LV+D+++ SF NLN W ++F ++ +PD P ++L NK D +R V + + WC Y+E K Sbjct: 10 LKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQF--KSKSINPDGTEKQLPILLLANKSD---SLTRAVDQSEINQWCTDHKVNLYYEVSAK 160
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27A_HUMAN (Ras-related protein Rab-27A OS=Homo sapiens GN=RAB27A PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 5.243e-25 Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + RVV E++A A A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEEAIA-LAEKYGIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 6.848e-25 Identity = 66/160 (41.25%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFET Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 6.848e-25 Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + R V E++AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRAVKEEEARE-LAEKYGIPYFET 162 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |