DY260467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 6.848e-25 Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + R V E++AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRAVKEEEARE-LAEKYGIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.628e-25 Identity = 58/150 (38.67%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQER++++ A+YRGA +LVYDV +F+N++ W +E A N +++GNK D+ + R V+ + A+++ A K + + ET Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD----SNIVIMLIGNKTDLK--HLRAVATEDAQSY-AEKEGLSFIET 154 HSP 2 Score: 23.8682 bits (50), Expect = 8.628e-25 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 551 KEIFLTLRPSAKEGINVEEAFQCI 622 KE + SA E +NVE+AFQ I Sbjct: 146 KEGLSFIETSALEALNVEKAFQTI 169
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.639e-25 Identity = 61/153 (39.87%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + E K Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLEASAK 153 HSP 2 Score: 25.0238 bits (53), Expect = 8.639e-25 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNAL 637 L SAK +NVEEAF +A++ + Sbjct: 148 LEASAKSSMNVEEAFFTLARDIM 170
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 66/160 (41.25%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K +IPYFET Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARD-LAEKYSIPYFET 162
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 60/150 (40.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++I+GDS VGK++L+N++ +F+ + KATIG DF TK ++ +++ T Q WDTAGQERF+++ +YRGA ++VYD+ S SF N+ W E A + +++GNK D++ SR V K+A+A+ A I + ET Sbjct: 10 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAE----QDILIMMVGNKSDLE--MSREVPTKEAQAF-AESNKISFLET 152
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.124e-24 Identity = 61/153 (39.87%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS +D + ++LGNK DV+ + R VS+++ G I + ET K Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVN--DKRQVSKERGEKLALDYG-IKFMETSAK 153 HSP 2 Score: 23.483 bits (49), Expect = 1.124e-24 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKN 631 + SAK INVE AF +A++ Sbjct: 148 METSAKANINVENAFYTLARD 168
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.124e-24 Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ E + LQIWDTAGQERF+++ A+YRGA +LVYDV KSF N+ NW A+ D+ +++GNK D+ +VV + ++ A + I + ET K Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT----DSVNKMLIGNKCDM--AEKKVVDSSRGKS-LADEYGIKFLETSAK 160 HSP 2 Score: 27.7202 bits (60), Expect = 1.124e-24 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALK 640 L SAK INVEEAF +AK+ K Sbjct: 155 LETSAKNSINVEEAFISLAKDIKK 178
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.461e-24 Identity = 57/150 (38.00%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A +N +++GNK D+ + R V +ARA+ A K N+ + ET Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----NNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNNLSFIET 153 HSP 2 Score: 21.9422 bits (45), Expect = 1.461e-24 Identity = 11/31 (35.48%), Postives = 17/31 (54.84%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCIAKNALKSGEEEQI 661 + SA + NVEEAF+ I + ++QI Sbjct: 151 IETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.462e-24 Identity = 56/150 (37.33%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K +++GDSGVGK++L+ ++ +F+ + K+TIG +F T+ + +++ QIWDTAGQER++++ A+YRGA ++VYD+ SFDN+ W +E A N +++GNK D+ + R VS ++A+A+ A++ N+ + ET Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIVIMLVGNKTDL--LHLRAVSTEEAQAF-AAENNLSFIET 152 HSP 2 Score: 21.9422 bits (45), Expect = 1.462e-24 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 569 LRPSAKEGINVEEAFQCI 622 + SA + NVEEAFQ + Sbjct: 150 IETSAMDASNVEEAFQTV 167
BLAST of DY260467 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.525e-24 Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ +F+ + TIG DF + + ++ LQ+WDTAGQERF+++ A+YRGA +LVYDV KSF+N+ NW + A+ + +++GNK D+D RVVS ++ +A A K IP+ E K Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYAN----EGVELILVGNKCDLD--EKRVVSTEQGQA-LADKFGIPFLEASSK 156 The following BLAST results are available for this feature:
BLAST of DY260467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260467 ID=DY260467; Name=DY260467; organism=Citrus clementina; type=EST; length=1301bpback to top |