DY260551

Overview
NameDY260551
Unique NameDY260551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1126
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.389e-15
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  158 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            E I  +++  DL   EA  ++D +++ E+ E  +SA+L  L  KGET  EI    +AM  +  K+    + ++IVGTGGDG+NT NIST +SI+ +A G  VAK             DVL+ALGV I
Sbjct:    4 EAILKVVNGNDLNAKEAYGAMDEIMSGESSEVQMSAYLTALSMKGETIEEITASTKAMRAHCVKLLNDEEVLEIVGTGGDGSNTFNISTTSSIVISAAGVPVAKHGNRSASSKCGAADVLEALGVNI 130          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_METNO (Anthranilate phosphoribosyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.389e-15
Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  191 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +   +V     A+DIVGTGGD + + N+ST A+I+ A+CG  VAK             DVL ALGV
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAADEIVGAAGALRERMVRVAAPPGAIDIVGTGGDHSGSYNVSTLAAIITASCGVPVAKHGNRAASSRSGAADVLAALGV 130          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVY (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=trpD PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.814e-15
Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  161 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L + G+
Sbjct:    4 IINKLYLQESLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGI 128          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.814e-15
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  158 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDI 131          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.814e-15
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  158 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDI 131          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.814e-15
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2
Query:  188 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            DLT+AEA+ +   +  EA EA I A L  LRAKGET  EI G A  M   A +++      VD  GTGGDG +T+N+ST +S + A  G  VAK             DVL+ +GV I
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGNYSVSSSSGSADVLEEIGVTI 129          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPA (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris GN=trpD PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.369e-15
Identity = 52/129 (40.31%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  152 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G    M      V    DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV I
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPADAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKI 132          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_NOCSJ (Anthranilate phosphoribosyltransferase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=trpD PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.369e-15
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 2
Query:  158 ELIDCLISRVDLT-EAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGV 529
            E++  L++  DL+ +  A A  + L  EA  A I+ F + LRAKGET  E+ GL   M   AT +   G  +DIVGTGGD + +VNIST ++I+AA  GA+V K             DVL++LG+
Sbjct:    6 EVLGALVAGSDLSADQTAWAMGEILSGEATVAQIAGFAIALRAKGETVEEVSGLVDTMYALATPISVPGRLLDIVGTGGDRSMSVNISTMSAIVAAGAGARVVKHGNRSASSQSGSADVLESLGI 130          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_LACCB (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei (strain BL23) GN=trpD PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.369e-15
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  158 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            + I+ +++  +LT  E++A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A       D ++IVGTGGD ANT NIST ++I+ AA G +VAK             DVL+ALG+ I
Sbjct:    4 QAIEKVVNHENLTFEESEAVLDEIMNGEAYEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTQVAKHGNRAASSKSGAADVLEALGLDI 130          
BLAST of DY260551 vs. ExPASy Swiss-Prot
Match: TRPD_COREF (Anthranilate phosphoribosyltransferase OS=Corynebacterium efficiens GN=trpD PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.369e-15
Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  230 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLQALGVPI 535
            + E D+  I+A L  +R +GETF +I G A+A +       V G G  +D  GTGGDGANT+NI+TGAS++AAA G KV K             DVL+AL +P+
Sbjct:   33 IGEYDDVHIAALLATIRTRGETFADIAGAAKAFLNAGRPFPVPGTG-VLDTAGTGGDGANTINITTGASLVAAAGGLKVVKHGNRSVSSKSGSADVLEALNIPL 135          
The following BLAST results are available for this feature:
BLAST of DY260551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
TRPD_METS31.389e-1540.16Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_METNO1.389e-1543.86Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_VIBVY1.814e-1541.60Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_THEPX1.814e-1541.41Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP31.814e-1541.41Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_NATPD1.814e-1542.74Anthranilate phosphoribosyltransferase OS=Natronom... [more]
TRPD_RHOPA2.369e-1540.31Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_NOCSJ2.369e-1540.80Anthranilate phosphoribosyltransferase OS=Nocardio... [more]
TRPD_LACCB2.369e-1540.16Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_COREF2.369e-1544.23Anthranilate phosphoribosyltransferase OS=Coryneba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YN24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260551 ID=DY260551; Name=DY260551; organism=Citrus clementina; type=EST; length=1126bp
TAATAATCCCCCCTATCACCGGCCTTCCTTACCGTCGCTTCCAAACTGTG
GATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAACTGCTATT
CCAACCCCTCAGCCGGCTGTTTCTGATAATACTCCCCCTCAAACGCCCTG
CTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGG
CGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCC
TTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGG
AGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGTGG
AAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCA
AACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGG
TGCAAAAGTTGCCAAGCAAGGGAGTCGGTCCAGTTCTTCTGCCTGTGGAA
GTGCTGATGTGTTACAAGCCTTGGGTGTCCCTATCCGACCTTGTAACCCA
ACGGGTGTATGACAGGGTGCGGACGAGGCAACGCTTCGGCTTCAGGATTC
CACCCAAGACCTCCTCCCCGTATAAACGTCGCTAACGCCCGCGACGCAGT
CGCACCCAGCCAACACCCTTCCCCCACCCCACCCCGCCCCCCCCGTCAAT
CCCCGCCCCGTCCCCACACCTGTGCAGCCCGTCGGTCCCGCTCACCCTCC
CACCCCCCCCCCACCCACCTCCCGCCCCCCCCCCCAATGACCCTAATCAC
GACCCCACCAGACACATCCGAACCCACACCACCCCCAACGACCCCCTACT
CCTCCCCCCCATCCCACCCACACACTGTCAACCACCGACCACCATCCATC
CACAACCACCTCCCTACTCCCATGTGCCCTCACTCGCACTCACCTCACCC
CTCCTCCCCCCACCCGCCCCCAGACCCCGCCCCACCCCCAACCACCACCA
ACCCCAAGCCACGTCACATACCCCCCCACCACTCCCAACCACACGAGTGC
CGCCCCCCCCCGCCACACCCCTCACCCCCCCACCCAACAACACCACACGC
CCCCCCCCACTATACCTCACACTACC
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