DY260554

Overview
NameDY260554
Unique NameDY260554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.277e-17
Identity = 50/167 (29.94%), Postives = 90/167 (53.89%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKA--ISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GPK+ S + +   ++ GM+V R +FS G  +YH + ++N+++A++ T K+ A+MLDT GPE++     ++   + L     +++  +  Q  TS  + I++ GL  SVK      +G Y+       S+ +   E +   V C + N + L  +   +LP
Sbjct:   22 TKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVK------VGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNVHLP 182          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.060e-14
Identity = 52/177 (29.38%), Postives = 93/177 (52.54%), Query Frame = 3
Query:  195 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKL-----CAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLT--PDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFPYLP 692
            ++ IV T+GP S SV+++   +  GM++AR +FS G+ EYH  T+ N++ AVK  + KL      A+ LDT GPE++   +       I LK    + LT   +  ++ + +++ ++++ +   VK G+ +F+   L +        L V EV  + +TC ++N  +L       LP
Sbjct:   47 LSGIVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLIS--------LIVREVGKDSLTCEVENGGSLGSRKGVNLP 215          

HSP 2 Score: 25.0238 bits (53), Expect = 3.060e-14
Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  697 IPIELPTLSDKDKEVHYSWGVPNKID 774
            +P++LP +S+KDK     +GV  ++D
Sbjct:  217 VPVDLPAVSEKDKS-DLLFGVEQEVD 241          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.380e-14
Identity = 45/142 (31.69%), Postives = 79/142 (55.63%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVK 623
            TKIV T+GP S S+++++  +++GM+VAR +FS G+ E H   ++N++ A K   K   ++LDT GPE++        I L+    ++++ D     T+  + + ++GL   V++G TI +   L  G E   V     E+K
Sbjct:    4 TKIVCTIGPASESIEMLTKLMESGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENGGIELETGKELIISMD-EVVGTTDKISVTYEGLVHDVEQGSTILLDDGLI-GLEVLDVDAAKREIK 143          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.415e-14
Identity = 50/158 (31.65%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATL 665
            TKIV T+GP S SV+ ++  ++AGM+VAR +FS G+ E H   ++N++ A     K   ++LDT GPE++       +I L A   ++++ D     T   + + +DGL   V  G TI +   L        V LEV+++  +  ++   + N+ TL
Sbjct:    4 TKIVCTIGPASESVEKLTQLMEAGMNVARLNFSHGDFEEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGSIELAAGSQLIVSMD-EVIGTPDKISVTYDGLIHDVSVGSTILLDDGL--------VGLEVTDINKDKREIVTKVMNSGTL 152          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 5.766e-14
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            TKIV T+GP S SVD +   ++AGM+VAR +FS G+ E H   + N++ A K T +  A++LDT GPE++  N    AI LK +GS ++        T + + + +  L   V  G  I +   L +
Sbjct:    5 TKIVCTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENGAIELK-EGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLIS 130          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
The following BLAST results are available for this feature:
BLAST of DY260554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYK_DICDI7.277e-1729.94Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_DROME3.060e-1429.38Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK_BACSU3.380e-1431.69Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_BACLI4.415e-1431.65Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_BACST5.766e-1436.22Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYK_STAAW7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YO03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260554 ID=DY260554; Name=DY260554; organism=Citrus clementina; type=EST; length=1119bp
ATCAACGAATAAACTATAAAATTCCAAACACTCTAATCAACGCTAACCGC
TGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGT
TCAGTGAAAGATGCATTCCAGTCACTTGCTTCTCGAGGAGCCAATCAGGA
TGGCTTCCATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACC
AAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATC
CGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGG
GTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTT
AAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGA
ATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATG
GTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTT
TTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACAC
CATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGT
GGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAG
AATACTGCAACGTTGGCTGGTTCCCTTTTCCCTTACCTGCCTCCCAATTC
CTATTGAACTGCCCACTCTTTCCGATAAAGATAAGGAGGTCCATTATTCT
TGGGGAGTTCCAAACAAAATTGACTTCCCCCCCTTGTCCCAAACCCCAAC
TGCCAAAAAACCTGCCCCCCCAGCCCCCCCAATTACTCCCCCCATTTGGG
TGACCCTCCCTCCAACCCCCAATTTTTCCCAAAAATCAAAAAAAAAAGGG
TTTGCCCCCTTTTTTAAGAACTCCTCCACCCCCCAAAAGGAATTATTCCC
TCCCCCGGGAAAATTGGGAACACCCCCCCTCCCCCCCGCAAAGGGTTTTC
CTGCTTCCCAAACCCTCCCCCCTTTTAACAGCTAAACTCAGCGCGCGAAA
CCCCCACCCACGGGTTCTCCCCGCTGTGTTCGGCACCAAAAAATCCAGAC
ACAACCACCGCGACAAACC
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