DY260554

Overview
NameDY260554
Unique NameDY260554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.530e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L       LP
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.835e-14
Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV-KGN-DVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S +++   +KAGM+VAR +FS G+   H+  ++ ++   K   K  A++LDT GPE++  N  +  I L+  GS V       E T +   + ++ L   V++G  I +   L        + L+V  + K N +V C + NT  L       LP
Sbjct:    4 TKIVCTIGPASESEEMLEKLIKAGMNVARLNFSHGDQAEHKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGLIELE-KGSEVTVSMTEVEGTPEKFSVTYENLINDVEEGSYILLDDGL--------IELQVKSIDKANGEVLCDVLNTGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.835e-14
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  201 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  +S      V +T D   E   T +   I++  L  +V+ G +I++   + T
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMT 150          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.678e-13
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  144 IRMASILEPSKASFFPA-MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFI 560
            IRM+ ILE  +   F A  TKIV T+GP    VD +   + AGM+V R +FS G+ E H   ++NL+ A+K    K  A++LDT GPE++  + + +K I L A   + +  D         +  +++ L  SVK G+TI I
Sbjct:   39 IRMSQILEHHEDEDFSAHRTKIVCTMGPSCWDVDKMVQLIDAGMNVCRLNFSHGDHEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSCIACSYEKLPSSVKPGNTILI 180          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.678e-13
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  201 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  ++      V +T D   E   T +   I++  L K+V  G +I++   + T
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMT 150          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.862e-13
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L       LP
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKKGVNLP 161          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.862e-13
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFPYLP 692
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L       LP
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKKGVNLP 161          
The following BLAST results are available for this feature:
BLAST of DY260554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYK_STAAC7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAAB7.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]
KPYK_STAA87.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA37.530e-1429.94Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_STAS19.835e-1431.74Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK1_TRYBB9.835e-1433.59Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_EIMTE1.678e-1336.62Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK2_TRYBB1.678e-1333.59Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_STAES2.862e-1330.54Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ2.862e-1330.54Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YO03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260554 ID=DY260554; Name=DY260554; organism=Citrus clementina; type=EST; length=1119bp
ATCAACGAATAAACTATAAAATTCCAAACACTCTAATCAACGCTAACCGC
TGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGT
TCAGTGAAAGATGCATTCCAGTCACTTGCTTCTCGAGGAGCCAATCAGGA
TGGCTTCCATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACC
AAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATC
CGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGG
GTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTT
AAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGA
ATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATG
GTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTT
TTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACAC
CATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGT
GGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAG
AATACTGCAACGTTGGCTGGTTCCCTTTTCCCTTACCTGCCTCCCAATTC
CTATTGAACTGCCCACTCTTTCCGATAAAGATAAGGAGGTCCATTATTCT
TGGGGAGTTCCAAACAAAATTGACTTCCCCCCCTTGTCCCAAACCCCAAC
TGCCAAAAAACCTGCCCCCCCAGCCCCCCCAATTACTCCCCCCATTTGGG
TGACCCTCCCTCCAACCCCCAATTTTTCCCAAAAATCAAAAAAAAAAGGG
TTTGCCCCCTTTTTTAAGAACTCCTCCACCCCCCAAAAGGAATTATTCCC
TCCCCCGGGAAAATTGGGAACACCCCCCCTCCCCCCCGCAAAGGGTTTTC
CTGCTTCCCAAACCCTCCCCCCTTTTAACAGCTAAACTCAGCGCGCGAAA
CCCCCACCCACGGGTTCTCCCCGCTGTGTTCGGCACCAAAAAATCCAGAC
ACAACCACCGCGACAAACC
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