DY260554

Overview
NameDY260554
Unique NameDY260554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.164e-12
Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            T I+ T+GP SRSVD +   +K+GM+VAR +FS G  EYH+ T++N++ A ++      T +  A+ LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K +  G  I++   L +
Sbjct:   44 TGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLIS 181          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.395e-12
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TK++ T+GP S S +++   ++ GM+ AR +FS G+   H+E +E +K   K  K   A++LD  GP+++  N       LK       T  CG E    +    I++  L + +K G +I +   L           +V EV+G D+ C +    T+
Sbjct:    4 TKMIFTIGPSSDSEEILREFIRIGMNAARLNFSHGDHASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTYNFKNGEAELKNGDE--FTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGLLE--------FKVKEVRGTDIICEVIEGGTI 151          

HSP 2 Score: 22.3274 bits (46), Expect = 3.395e-12
Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  697 IPIELPTLSDKDKEVHYSWGVPNKIDF 777
            +PI+LP +++KD+     +G   ++DF
Sbjct:  162 VPIKLPAVTEKDRS-DLIFGCEMEVDF 187          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 5.397e-12
Identity = 41/126 (32.54%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVL---TPDCGQEATSQVLPINFDGLAKSVKKGDTIFI 560
            + I+GT+GP + S ++IS   +AG+++ R +FS G+ EYHQ  +EN + + +  + +  A+ LDT GPE++  V K +K   +KA G V+L    P    +   +++ I++  + K +  G  IF+
Sbjct:   32 SSIIGTIGPNTNSAEMISKLRQAGLNIVRMNFSHGSYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKA-GHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFV 156          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 72.0182 bits (175), Expect = 7.048e-12
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V  G  +++   L +
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLIS 182          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.048e-12
Identity = 39/125 (31.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 560
            + I+GT+GPK+ +VDV+    KAG+++ R +FS G+ EYHQ  ++N K + +  K +  A+ LDT GPE++      +K   +  +  ++ T D    ++   +V+ I++  + K ++ G  I+I
Sbjct:   25 SSIIGTIGPKTNNVDVLVKLRKAGLNIVRMNFSHGSYEYHQSVIDNAKQSEEIYKGRPLAIALDTKGPEIRTGTTIDDKDYPILPNHEMIFTTDEAYAKKCDDKVMFIDYKNITKVIEAGKIIYI 149          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.202e-11
Identity = 39/156 (25.00%), Postives = 73/156 (46.79%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 665
            TKIV TLGP S  ++ I+   +AG +V RF+FS GN E H   +  ++   K T KL  + LDT G E++  ++     ++     + ++ D  +     ++ + + GL      G T+ I            + ++  + +  ++ C  +NT  +
Sbjct:    4 TKIVSTLGPASDDIETITKLAEAGANVFRFNFSHGNHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGKFTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLI------DDGAVGLTIKAKDEEKRELVCEAQNTGVI 153          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK2_YEAST (Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=PYK2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.202e-11
Identity = 39/125 (31.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLEN-LKAAVKTTKKLCAVMLDTVGPELQVVNK-SEKAISLKADGSVVLTPDCGQEATS--QVLPINFDGLAKSVKKGDTIFI 560
            T I+GT+GPK+ S + I+   KAG+++ R +FS G+ E+HQ  +EN +K+  +   +  A+ LDT GPE++     +++ + +  D  ++ T D     TS  +++ I++  L K +  G  I++
Sbjct:   23 TSIIGTIGPKTNSCEAITALRKAGLNIIRLNFSHGSYEFHQSVIENAVKSEQQFPGRPLAIALDTKGPEIRTGRTLNDQDLYIPVDHQMIFTTDASFANTSNDKIMYIDYANLTKVIVPGRFIYV 147          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.051e-11
Identity = 44/138 (31.88%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPE-----LQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            T I+ T+GP SRSVD +   +KAGM++AR +FS G+ EYH E++ N++ A ++      + +  A+ LDT GPE     LQ   +SE  I   +   V + P       ++ + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLIS 225          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.678e-11
Identity = 44/138 (31.88%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPE-----LQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            T I+ T+GP SRSVD +   +KAGM++AR +FS G+ EYH E++ N++ A ++      + +  A+ LDT GPE     LQ   +SE  I   +   V + P       ++ + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLIS 225          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.498e-11
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLT--PDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 578
            T I+ T+GP SRSV+ +   +KAGM++AR +FS G+ EYH E++ N++ AV++      + +  A+ LDT GPE++   +    E  + L     V++T  P       +  + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLIS 225          
The following BLAST results are available for this feature:
BLAST of DY260554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYK_CHICK3.164e-1231.88Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYK_CLOPE3.395e-1228.48Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_YARLI5.397e-1232.54Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]
KPYM_RABIT7.048e-1230.43Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_DEBHA7.048e-1231.20Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_LACDE1.202e-1125.00Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK2_YEAST1.202e-1131.20Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=P... [more]
KPYR_RAT2.051e-1131.88Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYR_MOUSE2.678e-1131.88Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]
KPYR_HUMAN3.498e-1130.43Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YO03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260554 ID=DY260554; Name=DY260554; organism=Citrus clementina; type=EST; length=1119bp
ATCAACGAATAAACTATAAAATTCCAAACACTCTAATCAACGCTAACCGC
TGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGT
TCAGTGAAAGATGCATTCCAGTCACTTGCTTCTCGAGGAGCCAATCAGGA
TGGCTTCCATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACC
AAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATC
CGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGG
GTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTT
AAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGA
ATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATG
GTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTT
TTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACAC
CATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGT
GGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAG
AATACTGCAACGTTGGCTGGTTCCCTTTTCCCTTACCTGCCTCCCAATTC
CTATTGAACTGCCCACTCTTTCCGATAAAGATAAGGAGGTCCATTATTCT
TGGGGAGTTCCAAACAAAATTGACTTCCCCCCCTTGTCCCAAACCCCAAC
TGCCAAAAAACCTGCCCCCCCAGCCCCCCCAATTACTCCCCCCATTTGGG
TGACCCTCCCTCCAACCCCCAATTTTTCCCAAAAATCAAAAAAAAAAGGG
TTTGCCCCCTTTTTTAAGAACTCCTCCACCCCCCAAAAGGAATTATTCCC
TCCCCCGGGAAAATTGGGAACACCCCCCCTCCCCCCCGCAAAGGGTTTTC
CTGCTTCCCAAACCCTCCCCCCTTTTAACAGCTAAACTCAGCGCGCGAAA
CCCCCACCCACGGGTTCTCCCCGCTGTGTTCGGCACCAAAAAATCCAGAC
ACAACCACCGCGACAAACC
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