DY260554

Overview
NameDY260554
Unique NameDY260554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.498e-11
Identity = 41/125 (32.80%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 560
            T I+ T+GPK+ SV+ I+    AG++V R +FS G+ EYHQ  ++N + A K    +  A+ LDT GPE++  N K+++ I + A   + +T D     E T + + +++  + K +  G  I++
Sbjct:   34 TSIICTIGPKTNSVEAINKLRDAGLNVVRMNFSHGSYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMYVDYVNITKVIAPGRIIYV 158          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_LEIBR (Pyruvate kinase (Fragment) OS=Leishmania braziliensis PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.569e-11
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  156 SILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQ 407
            SI EP + +       IV T+GP ++SV+ + G +K+GMSVAR +FS G+ EYHQ T+ N++ A        A+ LDT GPE++
Sbjct:   11 SIFEPLRTT-----GTIVCTIGPSTQSVEALKGLIKSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIR 89          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.569e-11
Identity = 42/126 (33.33%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVK-TTKKLCAVMLDTVGPELQVVNK-SEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFI 560
            T I+ T+GPK+ SV+ I+   +AG++V R +FS G+ EYHQ  +++ + A K    +  A+ LDT GPE++  N   +K I +KA   + ++ D  Q AT+   Q + +++  + K +  G  I++
Sbjct:   35 TSIICTIGPKTNSVEKINALRRAGLNVVRMNFSHGSYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTD-EQYATASDDQNMYVDYKNITKVISAGKLIYV 159          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.569e-11
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL-AGSL 677
            TKIV T+GP S S +++   ++AGM+VAR +FS GN   H+  +++++   +   K+  ++LDT GPE++  +     + L   G  +       E  + V  +++D L + V +G  I +   L              EV G DV   + +T  + +GSL
Sbjct:    4 TKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGKLEL-VTGQKIDISMTQVEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQ-----------LEVTGKDVARGLIHTLIINSGSL 152          
BLAST of DY260554 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.793e-11
Identity = 34/125 (27.20%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  198 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 560
            T I+GT+GPK+ +VD +    KAG+++ R +FS G+ EYHQ  ++N + + +    +  A+ LDT GPE++   N  +    +  +  ++ T D    +    +++ +++  + K ++ G  I++
Sbjct:   22 TAIIGTIGPKTNNVDTLVALRKAGLNIVRMNFSHGSYEYHQSVIDNARKSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYV 146          
The following BLAST results are available for this feature:
BLAST of DY260554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYK_NEUCR3.498e-1132.80Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_LEIBR4.569e-1142.86Pyruvate kinase (Fragment) OS=Leishmania brazilien... [more]
KPYK_EMENI4.569e-1133.33Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYK_BACPY4.569e-1128.57Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK2_CANGA7.793e-1127.20Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YO03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260554 ID=DY260554; Name=DY260554; organism=Citrus clementina; type=EST; length=1119bp
ATCAACGAATAAACTATAAAATTCCAAACACTCTAATCAACGCTAACCGC
TGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGT
TCAGTGAAAGATGCATTCCAGTCACTTGCTTCTCGAGGAGCCAATCAGGA
TGGCTTCCATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACC
AAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATC
CGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGG
GTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTT
AAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGA
ATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATG
GTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTT
TTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACAC
CATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGT
GGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAG
AATACTGCAACGTTGGCTGGTTCCCTTTTCCCTTACCTGCCTCCCAATTC
CTATTGAACTGCCCACTCTTTCCGATAAAGATAAGGAGGTCCATTATTCT
TGGGGAGTTCCAAACAAAATTGACTTCCCCCCCTTGTCCCAAACCCCAAC
TGCCAAAAAACCTGCCCCCCCAGCCCCCCCAATTACTCCCCCCATTTGGG
TGACCCTCCCTCCAACCCCCAATTTTTCCCAAAAATCAAAAAAAAAAGGG
TTTGCCCCCTTTTTTAAGAACTCCTCCACCCCCCAAAAGGAATTATTCCC
TCCCCCGGGAAAATTGGGAACACCCCCCCTCCCCCCCGCAAAGGGTTTTC
CTGCTTCCCAAACCCTCCCCCCTTTTAACAGCTAAACTCAGCGCGCGAAA
CCCCCACCCACGGGTTCTCCCCGCTGTGTTCGGCACCAAAAAATCCAGAC
ACAACCACCGCGACAAACC
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