DY260562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: RPN8_ASHGO (26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii GN=RPN8 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.510e-37 Identity = 74/141 (52.48%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 81 EKVLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKEN 500 E+V V PLVLLS++ +Y R+ KR VGVLLG + T+ V++S+A+PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF Y N +L+I+DV+ + +G+PT AY +EEVK++ Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDD 146
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.181e-16 Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 93 VHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFK-GTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID 434 +HPLV+ ++ + R P D+ +RV+G LLGS GTVD+ +SYAVP E + D +YH +M + ++N+KE +VGWYSTG + IH + VPNP+ + +D Sbjct: 30 IHPLVIFNVCDCFVRRP-DSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVD 140
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.578e-15 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V +HP++L SIV +Y R + RV+G LLG+ K +V+V++ ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 220
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.578e-15 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V +HP++L SIV +Y R + RV+G LLG+ K +V+V++ ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 220
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.578e-15 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V +HP++L SIV +Y R + RV+G LLG+ K +V+V++ ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY Sbjct: 92 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.593e-15 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V +HP++L SIV +Y R + RV+G LLG+ K +V+V++ ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAY 220
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EI3F1_DROMO (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.078e-14 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVE 485 V VHP+VL +V + R D+ RV+G LLGS KG V+V++ + VP +E D + +Y MY + +++NA E+VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGRMGLRAYICIQ 136
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_ANOGA (Eukaryotic translation initiation factor 3 subunit F OS=Anopheles gambiae GN=eIF3-S5 PE=3 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 8.662e-14 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V VHP+VL IV Y R D+ +RV+G LLGS KG V+V++ + +P +E + Y +Y + +R+NA E++VGW++TG ++ + IH+ + NPV + +D + KAY Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVDKGVVEVTNCFCLPHKEHTDQVEA---ELGYASDLYELNQRVNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGARMGIKAY 136
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.477e-13 Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAY 473 V VHP+VL IV Y R D+ +RV+G LLGS KG V+V++ + VP +E + Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D + KAY Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVDKGVVEVTNCFCVPHKEHADQVEA---ELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAARMGIKAY 136
BLAST of DY260562 vs. ExPASy Swiss-Prot
Match: EI3F1_DROWI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.477e-13 Identity = 44/133 (33.08%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 87 VLVHPLVLLSIVHNYHRVPQDTRKRVVGVLLGSSFKGTVDVSHSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVE 485 V VHP+VL +V + R D+ RV+G LLGS KG V+V++ + VP +E D + +Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV V +D + + +AY ++ Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGRMGLRAYVCIQ 136 The following BLAST results are available for this feature:
BLAST of DY260562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260562 ID=DY260562; Name=DY260562; organism=Citrus clementina; type=EST; length=1234bpback to top |