DY260570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.790e-26 Identity = 76/205 (37.07%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 609 F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A + DGYSGSDL L AA P N +R + DF + +++ SV+ +S N E +W++ YG+ Sbjct: 568 FAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYE--KWSQDYGD 755
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.790e-26 Identity = 76/205 (37.07%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 609 F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A + DGYSGSDL L AA P N +R + DF + +++ SV+ +S N E +W++ YG+ Sbjct: 568 FAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYE--KWSQDYGD 755
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.790e-26 Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 393 F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DVDL IA +GYSG+D+ N+C A+ Sbjct: 295 FEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDAS 430
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.338e-26 Identity = 61/136 (44.85%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 393 F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E IA DGYSG+D+ N+C A+ Sbjct: 291 FEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS 426
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.338e-26 Identity = 74/207 (35.75%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKE----RVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 606 F +A AP+ +F+DE+DSM RR EHEA R++K E +V DG+ D E V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++R+ L + ELA+DVD+ IA ++GYSG+D+ N+C A+ N + ++ P M+DF+ + ++V SVS ++++ + +W E +G Sbjct: 289 FEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDAS----LMAMRRRIEGLTPEEIRNISRAEMH-----MPTTMEDFESSLKKVSKSVS--ASDLEKYEKWIEEFG 484
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.054e-26 Identity = 76/205 (37.07%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEG-IANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 609 F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D G +A + +GYSGSDL L AA P N +R + DF + +++ SV+ +S N E +W++ YG+ Sbjct: 592 FAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRQITEKDFHNSLKRIRRSVAPQSLNSYE--KWSQDYGD 779
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.989e-26 Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 402 F+LA K+ P+++F+DE+D+ L +R+ +HEAM ++K EFM WDGL + + RVLVL ATNRP D+DEA+ RR+P+ + LP+A R KI+ + L K L ++ D G+ N G SGS +K +C +A P Sbjct: 177 FTLARKLEPTIIFIDEIDTFLRQRQRT-DHEAMAQIKAEFMSMWDGLLS-GQSRVLVLGATNRPADIDEAIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVP 308
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.989e-26 Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMA---DGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 609 F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++VLAATNRP +LDEA +RR +R+ V+LP RE ++ +L K+ S +D E +A +A DGYSGSDL L AA P N +RP+ DF + +++ SV+ +S N E +W++ YG+ Sbjct: 579 FAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPGVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYE--KWSQDYGD 766
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.989e-26 Identity = 76/205 (37.07%), Postives = 114/205 (55.61%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 609 F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A DGYSGSDL L AA P N +R + DF + +++ SV+ +S N E +W++ YG+ Sbjct: 580 FAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRAITESDFHSSLKRIRRSVAPQSLNSYE--KWSQDYGD 767
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.989e-26 Identity = 60/136 (44.12%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 393 F +A +P+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DVDL IA +GYSG+D+ N+C A+ Sbjct: 294 FEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429 The following BLAST results are available for this feature:
BLAST of DY260570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 281
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260570 ID=DY260570; Name=DY260570; organism=Citrus clementina; type=EST; length=949bpback to top |