DY260570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.189e-24 Identity = 68/205 (33.17%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV---DLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 606 F +A PS++F+DE+DS+L R + E R+MK EF+V +DG + +R+LV+ ATNRP +LD+AV+RR P+R+M+NLPD R+++I L K + + D+ IA+ G+S SDL LC AA P +R+ + +R ++ DF A + S S + M++L ++ +G Sbjct: 324 FQIARNAQPSIIFIDEIDSILCERSEK-DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVP--------------IREIDRSKLSMTDGEKIRKIRASDFDTALRTIRPSTSQKI--MSKLSDFSRSFG 511
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.858e-24 Identity = 72/215 (33.49%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGEGG 615 F+LA K++PS++FVDE+DS+L R + G EHE R++K EF++ W L +T D RVLVLAATN P+ +D+A RR RR + LPD R + +L ++ + + D+E I + YSGSDL L AA P + L++ ++ +RP+ +DDFK + + + SV+ + + +W++ +G G Sbjct: 544 FTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGSDLTALAKDAAMGP----------------LRSLGESLLFTKMESIRPINLDDFKTSIKVIRPSVNLQ--GLERYSEWDKEFGSQG 740
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.876e-24 Identity = 55/127 (43.31%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLC 381 FS+A K P+++F+DE+DS L R++ +HE+ MK +FM WDG + ++++V+ ATNRP D+D A++RR+ R V +P+A R +I+ VIL E++ + V+L IA A+G SGSDLK +C Sbjct: 169 FSVAQKFQPTIIFIDEIDSFLRDRQSH-DHESTAMMKAQFMTLWDGFSSSG-DQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23 Identity = 70/225 (31.11%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT------------------KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILA-KEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGEGGS 618 F++A K++PS++FVDE+DS++G R N E+E+ R++KNEF+V W L + +D RVLVLAATN P+ +DEA RR RR + LP+ R + +L+ ++ ++ D + + + +GYSGSD+ +L AA P +RP+ + DFK + + SVS + E +W +G GS Sbjct: 690 FAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGDKLLETEREM---------------IRPIGLVDFKNSLVYIKPSVSQDGLVKYE--KWASQFGSSGS 897
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.420e-23 Identity = 73/218 (33.49%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKE-----RVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGEGGS 618 F +A K++PS++F+DE+DSML R + E+E+ R++K E ++ W L +++D+ RVLVL ATN P+ +D+A RR R+L + LPD R ++ ++AK++ + D+D E I M +G+SGSDL +L AA P + +++ D +R +++ DF+ A + SVSSES E +W+ +G GS Sbjct: 556 FYMAKKLSPSIIFIDEIDSMLTARSD-NENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEP----------------IRDLGDKLMFADFDKIRGIEIKDFQNALLTIKKSVSSESLQKYE--EWSSKFGSNGS 754
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.420e-23 Identity = 64/188 (34.04%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDL---EGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVS 555 F +A P+++F+DE+DS+L R N E E R+MK EF++ DG+ + +R+LV+ ATNRP +LD A++RR P+R+++++P+A R K+I +L K + + D+ L + +A GYS SDL LC AA P +R S ++RP+ + DF+ A + + S + Sbjct: 264 FQIARNGQPTIIFIDEIDSILCER-NEKETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILRRFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVP--------------IRDLSRKDIKNLVSTELRPITLRDFEIAMKAIKPSTN 436
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SPAST_NEMVE (Spastin OS=Nematostella vectensis GN=v1g144095 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.391e-23 Identity = 70/201 (34.83%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 7 LASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK-EELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 606 LAS + S+ +DEVDS+L R GEHE R++K EF+V++DG+ +ER+LV+ ATNRP +LD+A +RR+ +R+ + LPD R+ ++ +LAK S +++ +A M + YSGSDL L AA P N ++ +VR + DF + + + SV E+ + WN LYG Sbjct: 411 LASILTTSLFTIDEVDSLLTERRE-GEHEHSRRLKTEFLVSFDGVVADPEERILVMGATNRPQELDDAALRRMVKRIHIPLPDKETRKVLLTKLLAKHHNPLSGAEIDRLARMTEHYSGSDLTALARDAALGP--------------IRDLNSDQLKSMAANEVRNITFQDFVNSLQIIRPSVGPETLKAYD--DWNRLYG 594
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.568e-22 Identity = 72/212 (33.96%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 606 F +A + SV+FVDE+DS+L R + G EHE+ R++K EF++ W L +T RVLVLAATN P+ +DEA RR +R + LP+ R K + +L + ++ DLE + N+ +GYSGSD+ L AA P N L +S + + P+ ++ FK + + SVS E + E +WN+ +G Sbjct: 464 FEVAKRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGP----------------LRNLGDALLTTSAEMIPPISLNHFKASLRTIRPSVSQEGIHRYE--EWNKQFG 657
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.124e-20 Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL------AKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 402 F LA APS +F+DE++S++ +R GEHE R+MK E +V DGL D + V VLAA+N P++LD A++RRL +R++V+LP R+ +I+ L + EL +D+D + DGYSGSD++ +C AA P Sbjct: 343 FELARYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMDGLARSD-DLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRP 483
BLAST of DY260570 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.623e-19 Identity = 54/125 (43.20%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK--EELASDVDLEGIANMADGYSGSDL 369 F +A + PS++F+DE+DS+ G R GE E+ R++K EF+V +G+ KD+ VLVL ATN P+ LD A+ RR +R+ + LP+A R ++ + + K EL S D + +A M DGYSGSD+ Sbjct: 214 FEMAREQKPSIIFIDEIDSLCGSRSE-GESESSRRIKTEFLVQMNGVG-KDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQ-DFKELAKMTDGYSGSDI 335 The following BLAST results are available for this feature:
BLAST of DY260570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 281
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260570 ID=DY260570; Name=DY260570; organism=Citrus clementina; type=EST; length=949bpback to top |