DY260572

Overview
NameDY260572
Unique NameDY260572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1170
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.365e-30
Identity = 74/214 (34.58%), Postives = 107/214 (50.00%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC-GKYLESGVLIVGYG 641
            KFSD+T  EFR   L  N   R   +  +   L     P   DWR  G V  V++QG CGSCW+ S   A+E    + +G  V LS QQLVDC        +   + GCNGG   + FEY+ K  G+E + DYPY+G +      DKS+    ++ +  +++ E  +   +   GP++  +    M++Y GG+     C G  L  GV +VGYG
Sbjct:   74 KFSDITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDC-------STSYGNHGCNGGFAVNGFEYV-KDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYG 278          

HSP 2 Score: 27.7202 bits (60), Expect = 7.365e-30
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KN+WG +WGE G I
Sbjct:  289 KNTWGADWGESGYI 302          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.364e-29
Identity = 88/246 (35.77%), Postives = 120/246 (48.78%), Query Frame = 3
Query:    6 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            F DLT  EF +   G  R+       +K  I   +    +P   DWR  G VT VK+QG C S W+FSATG+LEG  F  T  L+ LSEQ L+DC          +   GC+GG M  AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L   VL+VGYG  G       G +    K + GE  G K
Sbjct:   80 FGDLTNIEFVKMMTGFQRQ-----KIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG-QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEES---DGNSFWLVKNSWGEEWGMK 309          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.033e-29
Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 3
Query:  114 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLES---GVLIVGYGS 644
            +P+  DWR+   VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC        +GS   GC GG  +SAF+Y+++ G +  E +YPY     G C+ D++   + VS     +V S  E  +   +   GP+A+ I+A     + Y+ GV     C   L+     VL +GYG+
Sbjct:  309 IPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCR-DRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGT 484          

HSP 2 Score: 27.7202 bits (60), Expect = 6.033e-29
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSW  NWG DG +
Sbjct:  494 KNSWSTNWGMDGYV 507          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 124.405 bits (311), Expect = 7.914e-29
Identity = 85/226 (37.61%), Postives = 119/226 (52.65%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGK---YLESGVLIVGYG-SSGFP 656
            +FSD++ +E + ++L    +      A K+  L  T   P   DWR  G  V+ VK+QGACGSCW+FS TGALE A  ++TG+++SL+EQQLVDC  + +       + GC GGL + AFEYIL   G+  E  YPY G D G CKF   K    V + + I+  DE+ M   +  + P++           Y  G+     C K    +   VL VGYG  +G P
Sbjct:   81 QFSDMSFAEIKHKYLWSEPQ---NCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD-GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIP 295          

HSP 2 Score: 25.0238 bits (53), Expect = 7.914e-29
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG  WG +G
Sbjct:  300 KNSWGPQWGMNG 311          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.342e-28
Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYG 641
            P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L   VL VGYG
Sbjct:  117 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYG 285          

HSP 2 Score: 31.9574 bits (71), Expect = 1.342e-28
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  665 VSRKNLTGI*KNSWGENWGEDGII 736
            + + N   I KNSWGENWG  G I
Sbjct:  286 IQKGNKHWIIKNSWGENWGNKGYI 309          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.509e-28
Identity = 70/182 (38.46%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  114 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+K GG+  + DYPY   +G   G  K +   +   +  +  + ++++      V H P+   I++     Q Y  GV     CG  L  GV++VGYG+
Sbjct:  137 LPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNV--MIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV-FDGSCGTNLNHGVVVVGYGT 306          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.970e-28
Identity = 75/208 (36.06%), Postives = 111/208 (53.37%), Query Frame = 3
Query:  114 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGE 722
            LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+  GG+  + DYPY   +G   G  K D   +   +  +  + ++++      V H P+   V  ++   Q Y  GV     CG  L  GV++VGYG+         G+     K + G+  GE
Sbjct:  144 LPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNV--MIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV-FDGTCGTNLNHGVVVVGYGTE-------NGRDYWIVKNSRGDTWGE 332          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.855e-28
Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYG 641
            P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L   VL VGYG
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG 284          

HSP 2 Score: 31.9574 bits (71), Expect = 3.855e-28
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  665 VSRKNLTGI*KNSWGENWGEDGII 736
            + + N   I KNSWGENWG  G I
Sbjct:  285 IQKGNKHWIIKNSWGENWGNKGYI 308          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.855e-28
Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYG 641
            P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L   VL VGYG
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG 284          

HSP 2 Score: 31.9574 bits (71), Expect = 3.855e-28
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  665 VSRKNLTGI*KNSWGENWGEDGII 736
            + + N   I KNSWGENWG  G I
Sbjct:  285 IQKGNKHWIIKNSWGENWGNKGYI 308          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.855e-28
Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYG 641
            P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L   VL VGYG
Sbjct:  116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG 284          

HSP 2 Score: 31.9574 bits (71), Expect = 3.855e-28
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  665 VSRKNLTGI*KNSWGENWGEDGII 736
            + + N   I KNSWGENWG  G I
Sbjct:  285 IQKGNKHWIIKNSWGENWGNKGYI 308          
The following BLAST results are available for this feature:
BLAST of DY260572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATLL_PHACE7.365e-3034.58Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
TEST2_RAT1.364e-2935.77Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CFAD_DICDI6.033e-2940.00Counting factor associated protein D OS=Dictyostel... [more]
CATH_HUMAN7.914e-2937.61Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATK_CANFA1.342e-2840.78Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CPR3_ARATH1.509e-2838.46Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPR4_ARATH1.970e-2836.06Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATK_MACMU3.855e-2840.22Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA3.855e-2840.22Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN3.855e-2840.22Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260572 ID=DY260572; Name=DY260572; organism=Citrus clementina; type=EST; length=1170bp
CCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGC
TTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCTATTCT
CCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCCTACATTTGCG
GGAAGTATTTGGAATCTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGT
TTCCCCCCGATCCCGTTTCAAGGAAAAACCTTACTGGAATCTAAAAAAAC
TCCTGGGGAGAGAACTGGGGAGAAGATGGGATAATATAAAATCTGCCTGG
GGTCGCACAGGTCTGGGGGGGTCCAATCCAAGGGTCTCACCCGAATAGCG
CTGGCCCACACAACCCTAAATTTAAAACATTTACGAAGGTTGTGCCTGCG
CCAAGTGTATCCTCAACCACTAAAAAAATTCAACCAAATCCCCCTTCTAC
ACCCCCCTCCTTCAACATCTCACACCATCCCTACACCACCCGGGCCAGGG
CTGTTACCCATCTCACCAGCTCTCCACTCCAGTTAGAACACCCCACCCGA
GCCTACAATTCTACAATTTCACCTCCCTTTCCTCCCGAACGCCACCGCCC
TCGCGCCAACACTCATAAGGAGAACAAACGCGAATCACCAAAGACCCACC
ATCATTCAACAATGCGAAGCGCCACGCGAGAACATACAAATAAATAAACC
AAATAAACCTCCAGTAACCT
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