DY260572

Overview
NameDY260572
Unique NameDY260572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1170
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.624e-26
Identity = 81/219 (36.99%), Postives = 112/219 (51.14%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYGSSG 650
            +F+D++  EF   +L L    R+P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +   +   LSEQ LVDC    D E       GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F+ I S ++   A  ++   ++V ++A   Q Y  GV     C K L  GV++VG  + G
Sbjct:   75 QFADMSQQEFASTYLSL----RVPKTAKLNASNANFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFTDIDSCDE--LAQAIQERTVSVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADG 276          

HSP 2 Score: 26.5646 bits (57), Expect = 2.624e-26
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            +NSWG +WGE G I
Sbjct:  281 RNSWGSSWGEAGHI 294          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.427e-26
Identity = 78/219 (35.62%), Postives = 110/219 (50.23%), Query Frame = 3
Query:    9 SDLTPSEFR-RQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            +DLT  EF  R  L L  +  L    Q +       +  LP   DWR  GAVT V++QG CGSC++F+   ALE  H   TG L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT+   C++ +S      + F+ I   DE  +   + K GP+ VGI+      + Y  GV     CG+  +  VL VGYG+
Sbjct:  143 ADLTDEEFMVRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTE-QRCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGR-PDHAVLAVGYGT 351          

HSP 2 Score: 29.261 bits (64), Expect = 4.427e-26
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG +WG+DG +
Sbjct:  362 KNSWGTDWGKDGYV 375          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.787e-26
Identity = 80/219 (36.53%), Postives = 111/219 (50.68%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYGSSG 650
            +F+D++  EF + +L L    ++P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F  I S ++   A  ++   +AV ++A   Q Y  GV     C K L  GV++VG  + G
Sbjct:   75 QFADMSQQEFAQTYLSL----KVPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFKDIDSCDE--LAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADG 276          

HSP 2 Score: 26.5646 bits (57), Expect = 5.787e-26
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            +NSWG +WGE G I
Sbjct:  281 RNSWGSSWGEAGHI 294          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.008e-26
Identity = 77/208 (37.02%), Postives = 109/208 (52.40%), Query Frame = 3
Query:  114 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            +P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ + GG++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C +  +   VL+VGYG+        +G      K + GE  G K
Sbjct:  115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD-ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGNKYWIIKNSWGESWGNK 305          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.534e-26
Identity = 73/224 (32.59%), Postives = 109/224 (48.66%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRL--RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPP 659
            +FS L P EF+  +LG       R PA+ Q+   +P   LP  FDWRD   V  V++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  ++ +    +  +  YP+   +G    F +S+   +V +FS  +    ED+MA  L+  GPL V ++A+  Q Y+GG+   +         VLI G+  +G  P
Sbjct:   62 QFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP--IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVLITGFDRTGNTP 274          

HSP 2 Score: 25.0238 bits (53), Expect = 7.534e-26
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            +NSWG +WG +G
Sbjct:  279 RNSWGSSWGVEG 290          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 2.663e-25
Identity = 87/266 (32.71%), Postives = 125/266 (46.99%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEKMG*YKICLGSHRSGGV 773
            +FSDL+  EF+ +++G      LP D    P           DLP   DWR  GAVT VK QG C SCW+FS    +EG + + TG LV LSEQ+LVDCD +           GCN G  +++ +Y+ +  G+     YPY      +C+ ++       +N    + S+ +    N + H P++V + +     Q Y GG+     CG  ++  V  VGYG SG       GK  +  K + G   GE  G  +I   S  S GV
Sbjct:   95 EFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQ-NGIHLRAKYPYIAKQ-QTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGI-FEGSCGTKVDHAVTAVGYGKSG-------GKGYILIKNSWGPGWGEN-GYIRIRRASGNSPGV 335          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.663e-25
Identity = 79/207 (38.16%), Postives = 105/207 (50.72%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L   VL VGYG         +GK     K + GE  G K
Sbjct:  117 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNK 306          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 5.932e-25
Identity = 76/219 (34.70%), Postives = 111/219 (50.68%), Query Frame = 3
Query:    6 FSDLTPSEFRRQFLGLN-RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLESGVLIVGYGSSG 650
            F D+T  EFR+  + +    ++     QK   L  N LP   +W+  G VT V+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC     P+ +     GC  G    A  Y+++ GG+E E  YPY   D GSC++      A ++ F  +  +ED +   +   GP++V I+A       Y  G+     C    +   +L+VGYG +G
Sbjct:   80 FGDMTLEEFRKVMIEIPVPTVKKGKSVQKR--LSVN-LPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSR---PQGNW----GCYLGNTYLALHYVMENGGLESEATYPYEEKD-GSCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTG 287          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.196e-25
Identity = 73/221 (33.03%), Postives = 115/221 (52.04%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADA---QKAPILPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYG 641
            ++SDL  +   R+  G    L+    A    +  ++   D     LP   DWRD   VT VK+Q  CGSCW+FS    +E  + +   + ++LSEQ LV+CD         + ++GC GGLM+ A E IL+ GGV   ++ PY G D G CK    +++ + S   V+  +E+++   LV +GP++V I+   +  Y  G++      + L   VL+VGYG
Sbjct:   79 EYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD-GVCKKSPFELSISGSRRYVL-QNENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNEGLNHAVLLVGYG 288          

HSP 2 Score: 28.1054 bits (61), Expect = 6.196e-25
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG  WGE+G
Sbjct:  299 KNSWGAEWGEEG 310          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.322e-24
Identity = 79/244 (32.38%), Postives = 113/244 (46.31%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            +F+DL+  EF  +++G      +     +  I   T +LP + DWR  GAVT V+ QG+CGSCW+FSA   +EG + + TG+LV LSEQ+LVDC+             GC GG    A EY+ K  G+     YPY    G              S    +  + +    N +   P++V + +     Q Y GG+     CG  ++  V  VGYG SG       GK  +  K + G   GEK
Sbjct:   95 EFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGI-FEGPCGTKVDHAVTAVGYGKSG-------GKGYILIKNSWGTAWGEK 320          
The following BLAST results are available for this feature:
BLAST of DY260572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATL2_PARTE2.624e-2636.99Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATL_BRUPA4.427e-2635.62Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL1_PARTE5.787e-2636.53Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_RAT7.008e-2637.02Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATO_MOUSE7.534e-2632.59Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PAPA4_CARPA2.663e-2532.71Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATK_PIG2.663e-2538.16Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATM_MOUSE5.932e-2534.70Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_GVCP6.196e-2533.03Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
PAPA3_CARPA1.322e-2432.38Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260572 ID=DY260572; Name=DY260572; organism=Citrus clementina; type=EST; length=1170bp
CCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGC
TTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCTATTCT
CCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCCTACATTTGCG
GGAAGTATTTGGAATCTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGT
TTCCCCCCGATCCCGTTTCAAGGAAAAACCTTACTGGAATCTAAAAAAAC
TCCTGGGGAGAGAACTGGGGAGAAGATGGGATAATATAAAATCTGCCTGG
GGTCGCACAGGTCTGGGGGGGTCCAATCCAAGGGTCTCACCCGAATAGCG
CTGGCCCACACAACCCTAAATTTAAAACATTTACGAAGGTTGTGCCTGCG
CCAAGTGTATCCTCAACCACTAAAAAAATTCAACCAAATCCCCCTTCTAC
ACCCCCCTCCTTCAACATCTCACACCATCCCTACACCACCCGGGCCAGGG
CTGTTACCCATCTCACCAGCTCTCCACTCCAGTTAGAACACCCCACCCGA
GCCTACAATTCTACAATTTCACCTCCCTTTCCTCCCGAACGCCACCGCCC
TCGCGCCAACACTCATAAGGAGAACAAACGCGAATCACCAAAGACCCACC
ATCATTCAACAATGCGAAGCGCCACGCGAGAACATACAAATAAATAAACC
AAATAAACCTCCAGTAACCT
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