DY260572

Overview
NameDY260572
Unique NameDY260572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1170
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.465e-15
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 422
            +FSD++  EF+ Q+L        L +   L A AQ   I   N +P + D R  G VT +K+Q ACGSCW+FS    +E  +       + LSEQ+LVDC          +   GC G  + +   YI K G VE E+ YPY   +G
Sbjct:   67 QFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREG 201          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.382e-15
Identity = 66/236 (27.97%), Postives = 101/236 (42.80%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRD-HGA--VTGVKDQGACGSCWSFSATGALEG--AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            ++  LT  +  R+  G +R++  P  A     +      LPT +DWR+ HG   V+ V++Q +CGSC+SF++ G LE       S  +   LS Q++V C              GC GG          +  G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+AV              ++  T   G+  P+   +     VL+VGYG+
Sbjct:  192 EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD-SPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGT 414          

HSP 2 Score: 29.6462 bits (65), Expect = 2.382e-15
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG  WGEDG
Sbjct:  426 KNSWGTGWGEDG 437          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.498e-15
Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 3
Query:  111 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYG 641
            D+P   D+R+ G V   KDQG CGSCW+F++ G +E  +     + +++LSEQ++VDC            + GC+GG    +F Y ++  G+    DY Y   D   C   + K    +S+   +  +E   A N V  GP++V +      ++ GG      C + L   VL+VGYG
Sbjct:  338 DVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEV--GPVSVNVGVTDDFSFYGGGIFNGTCTEELNHSVLLVGYG 503          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.023e-15
Identity = 68/236 (28.81%), Postives = 102/236 (43.22%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRD-HGA--VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            ++  LT  E  R+  G +RR+  P  A     +      LPT +DWR+ HG   VT V++QG+CGSC+SF++ G +E    + T    +  LS Q++V C              GC GG          +  G+  E  +PYTGTD   C+  +       S +  +       +E  M   LV  GP+AV              V+  T   G+  P+   +     VL+VGYG+
Sbjct:  192 EYETLTLKEMIRRGGGHSRRIPRPKPAPITAEIQKKILHLPTSWDWRNVHGINFVTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTD-SPCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHHT---GLRDPFNPFELTNHAVLLVGYGT 414          

HSP 2 Score: 28.1054 bits (61), Expect = 4.023e-15
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG +WGE+G
Sbjct:  426 KNSWGTSWGENG 437          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.147e-14
Identity = 66/236 (27.97%), Postives = 102/236 (43.22%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRD-HGA--VTGVKDQGACGSCWSFSATGALEGAHFLST--GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            ++  LT  +  R+  G +R++  P  A     +      LPT +DWR+ HG   V+ V++Q +CGSC+SF++ G LE    + T   +   LS Q++V C              GC GG          +  G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+AV              ++  T   G+  P+   +     VL+VGYG+
Sbjct:  192 EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD-SPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGT 414          

HSP 2 Score: 27.7202 bits (60), Expect = 1.147e-14
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG  WGE+G
Sbjct:  426 KNSWGTGWGENG 437          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.542e-14
Identity = 70/225 (31.11%), Postives = 101/225 (44.89%), Query Frame = 3
Query:    9 SDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK-HGPLAV--GINAV-WMQTYIGGVSCPYICGKYLE-SGVLIVGYGSS 647
            SDL+  EF+ ++L        L  +  L A+     I   N +P++ D R    VT ++ QG CGSCW+FS   A E A+       + LSEQ+LVDC          +   GC+G  +    EYI + G VE E+ YPY   +   C+   S+     +   +   D  Q+   L + H  +AV  GI  +   Q Y G     +  G       V IVGYGS+
Sbjct:   68 SDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVARE-QRCRRPNSQHYGISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNYHAVNIVGYGST 279          

HSP 2 Score: 22.3274 bits (46), Expect = 2.542e-14
Identity = 6/12 (50.00%), Postives = 8/12 (66.67%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            +NSW   WG+ G
Sbjct:  288 RNSWDTTWGDSG 299          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 4.295e-14
Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  129 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 581
            DWR++   T VK+QG C S W+FS + +LE  + +   + ++ S QQ+VDCD+          ++GC+GG    A EY+L+ G V    +YPY   +  +CK  ++     ++ +S +   +  +   L  + P++VG+ A   Q Y  G+
Sbjct:  116 DWRNY---TTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRVGLVS-STNYPYVAKN-QTCKQSRNG-TYFINGYSFVGGSQSNLQYYLNNY-PISVGVEASNWQFYRSGL 250          

HSP 2 Score: 26.1794 bits (56), Expect = 4.295e-14
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            +NSWG  WGE G I
Sbjct:  277 QNSWGTQWGESGNI 290          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.570e-13
Identity = 57/194 (29.38%), Postives = 91/194 (46.91%), Query Frame = 3
Query:  111 DLPTDFDWRDHGAV---TGVKDQGACGSCWSFSATGALEGAHFLST--GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVG--INAVWMQTYIG-----GVSCPYICGKYLESGVLIVGYG 641
            +LP  +DWR+   V   + V++Q +CGSC+SF++ G LE    + T   +   LS Q++V C              GC+GG          +  GV  E  +PYT  D   CK  ++ +    S++  +       +E  M   LVKHGP+AV   ++  ++  + G     G+S P+   +     VL+VGYG
Sbjct:  229 NLPESWDWRNVQGVNYVSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYA---------QGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKD-SPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYG 412          

HSP 2 Score: 30.0314 bits (66), Expect = 1.570e-13
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG NWGE G
Sbjct:  425 KNSWGSNWGESG 436          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 2.067e-13
Identity = 61/230 (26.52%), Postives = 96/230 (41.74%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH--GAVTGVKDQGACGSCWSFSATGALEGAHFLS--TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY-------TGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVG--INAVWMQTYIGGVSCPYICGKYLESG--VLIVGYGS 644
            +F  LT  E     + ++        A +      +D+P  FD+R+     +  V DQG CGSCW+FS+         ++    + V  S Q +V CDH          D  CNGG + + ++++ K  G   ++  PY        GT    C    SK+  A  +++     D   M   L   GPL V   +++ +M    G     Y    Y+E G  V +VGYG+
Sbjct:   38 RFEGLTKDEISSLLMPVSFLKNAKGAAPRGTFTDKDDVPESFDFREEYPHCIPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVKYSPQYVVSCDHG---------DMACNGGWLPNVWKFLTKT-GTTTDECVPYKSGSTTLRGTCPTKCADGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTY---GYMEGGHAVEMVGYGT 254          

HSP 2 Score: 30.8018 bits (68), Expect = 2.067e-13
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  695 KNSWGENWGEDGII*NLPGV 754
            KNSWG +WGEDG    + G+
Sbjct:  265 KNSWGPDWGEDGYFRMIRGI 284          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.160e-12
Identity = 48/144 (33.33%), Postives = 70/144 (48.61%), Query Frame = 3
Query:    9 SDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 419
            SDL+  EF+ QFL        L  +  L A+     I   + LP++ D R    VT ++ QG CGSCW+FS   + E A+       + L+EQ+LVDC          +  +GC+G  +    EYI +  GV +E  YPY   +
Sbjct:   68 SDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVS-LPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEYI-QQNGVVQEHYYPYVARE 199          
The following BLAST results are available for this feature:
BLAST of DY260572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
PEPT1_PSOOV1.465e-1536.05Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATC_PONAB2.382e-1527.97Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CYSP_PLAVS2.498e-1531.46Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATC_BOVIN4.023e-1528.81Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_HUMAN1.147e-1427.97Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
PEPT1_DERFA2.542e-1431.11Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CATL3_PARTE4.295e-1430.46Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATC_MOUSE1.570e-1329.38Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATB2_GIALA2.067e-1326.52Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
PEPT1_EURMA1.160e-1233.33Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260572 ID=DY260572; Name=DY260572; organism=Citrus clementina; type=EST; length=1170bp
CCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGC
TTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCTATTCT
CCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCCTACATTTGCG
GGAAGTATTTGGAATCTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGT
TTCCCCCCGATCCCGTTTCAAGGAAAAACCTTACTGGAATCTAAAAAAAC
TCCTGGGGAGAGAACTGGGGAGAAGATGGGATAATATAAAATCTGCCTGG
GGTCGCACAGGTCTGGGGGGGTCCAATCCAAGGGTCTCACCCGAATAGCG
CTGGCCCACACAACCCTAAATTTAAAACATTTACGAAGGTTGTGCCTGCG
CCAAGTGTATCCTCAACCACTAAAAAAATTCAACCAAATCCCCCTTCTAC
ACCCCCCTCCTTCAACATCTCACACCATCCCTACACCACCCGGGCCAGGG
CTGTTACCCATCTCACCAGCTCTCCACTCCAGTTAGAACACCCCACCCGA
GCCTACAATTCTACAATTTCACCTCCCTTTCCTCCCGAACGCCACCGCCC
TCGCGCCAACACTCATAAGGAGAACAAACGCGAATCACCAAAGACCCACC
ATCATTCAACAATGCGAAGCGCCACGCGAGAACATACAAATAAATAAACC
AAATAAACCTCCAGTAACCT
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