DY260572

Overview
NameDY260572
Unique NameDY260572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1170
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.702e-12
Identity = 55/196 (28.06%), Postives = 84/196 (42.86%), Query Frame = 3
Query:  114 LPTDFDWRD---HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            LPT +DWR+      V+ V++Q +CGSC++F++T  LE    + T    +  LS Q++V C              GC GG          +  G+  E  +PY G+D       C    S     V  F   + +E  M   LV+HGP+AV              ++  T   G+  P+   +     VL+VGYG+
Sbjct:  204 LPTSWDWRNVRGTNFVSPVRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQEIVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYVGGF-YGACNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHT---GLRDPFNPFELTNHAVLLVGYGT 386          

HSP 2 Score: 30.0314 bits (66), Expect = 4.702e-12
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KNSWG  WGEDG
Sbjct:  398 KNSWGSRWGEDG 409          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.491e-12
Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  333 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSC-PYICGKYLESGVLIVGYGSSG 650
            GGL++ AF+Y+   GG++ E+ YPY    G SCK+      A V+++  I S E+++   L   GP++  I+A     + Y  G+   P    + ++ GVL+VGYG+ G
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPY-HAQGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG 108          

HSP 2 Score: 28.4906 bits (62), Expect = 6.491e-12
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG +WG DG I
Sbjct:  120 KNSWGTDWGMDGYI 133          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.522e-12
Identity = 78/294 (26.53%), Postives = 123/294 (41.84%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPA-----DAQKAPILPTNDLPTDFDWRD-----HGAVTGVKDQGACGSCWSFSATGALEGAHFL--STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAG---GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-----SSDEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEKMG*YKICLGSHRSGGVQSKGL 788
            + S  T  E R +  G+   +  P+        K  I  T +LP +FDW          VT +++QG CGSC++  +  ALE    L  +  E   LS Q +VDC              GCNGG     F +++  K G   G+ ++   PYTG D G C   K+      +++S I     +++E  M   L+ +GP  VG             ++  T +      +   +     VL+VGYG          G+   + K + G   GE+ G ++I  G+    GV+S G+
Sbjct:  176 ELSKYTIDELRNRAGGVKSMVTRPSVLNRKTPSKELISLTGNLPLEFDWTSPPDGSRSPVTPIRNQGICGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDC---------SPYSEGCNGG-----FPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVD-----KLSGEPYWKVKNSWGVEWGEQ-GYFRILRGTDEC-GVESLGV 448          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 9.824e-12
Identity = 48/149 (32.21%), Postives = 70/149 (46.98%), Query Frame = 3
Query:    9 SDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 434
            SDL+  EF+ +FL        L  +  L A+     I    + P + D R    VT ++ QG CGSCW+FS   A E A+     + + L+EQ+LVDC          +   GC+G  +    EYI +  GV +E  Y Y   +  SC+
Sbjct:   68 SDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSI--NGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEYI-QHNGVVQESYYRYVARE-QSCR 202          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.676e-11
Identity = 67/231 (29.00%), Postives = 104/231 (45.02%), Query Frame = 3
Query:  114 LPTDFDWRDHGA---VTGVKDQGACGSCWSFSATGALEGAHFLST--GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPLAVG--INAVWMQTYIG-----GVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEKMG*YKICLGS 755
            LP  +DWR+      V+ V++Q +CGSC+SF++ G LE    + T   +   LS Q++V C              GC+GG          +  GV  E  +PYT TD   CK  ++ +    S +  +       +E  M   LVKHGP+AV   ++  ++  + G     G+S P+   +     VL+VGYG       P  G      K + G + GE  G ++I  G+
Sbjct:  230 LPESWDWRNVRGINFVSPVRNQESCGSCYSFASLGMLEARIRILTNNSQTPILSPQEVVSCSPYA---------QGCDGGFPYLIAGKYAQDFGVVEENCFPYTATD-APCKPKENCLRYYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKD-----PVTGLDYWIVKNSWGSQWGES-GYFRIRRGT 444          
The following BLAST results are available for this feature:
BLAST of DY260572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATC_CANFA4.702e-1228.06Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATL1_FELCA6.491e-1233.94Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATC_SCHMA7.522e-1226.53Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
PEPT1_DERPT9.824e-1232.21Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATC_RAT1.676e-1129.00Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260572 ID=DY260572; Name=DY260572; organism=Citrus clementina; type=EST; length=1170bp
CCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGC
TTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCTATTCT
CCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCCTACATTTGCG
GGAAGTATTTGGAATCTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGT
TTCCCCCCGATCCCGTTTCAAGGAAAAACCTTACTGGAATCTAAAAAAAC
TCCTGGGGAGAGAACTGGGGAGAAGATGGGATAATATAAAATCTGCCTGG
GGTCGCACAGGTCTGGGGGGGTCCAATCCAAGGGTCTCACCCGAATAGCG
CTGGCCCACACAACCCTAAATTTAAAACATTTACGAAGGTTGTGCCTGCG
CCAAGTGTATCCTCAACCACTAAAAAAATTCAACCAAATCCCCCTTCTAC
ACCCCCCTCCTTCAACATCTCACACCATCCCTACACCACCCGGGCCAGGG
CTGTTACCCATCTCACCAGCTCTCCACTCCAGTTAGAACACCCCACCCGA
GCCTACAATTCTACAATTTCACCTCCCTTTCCTCCCGAACGCCACCGCCC
TCGCGCCAACACTCATAAGGAGAACAAACGCGAATCACCAAAGACCCACC
ATCATTCAACAATGCGAAGCGCCACGCGAGAACATACAAATAAATAAACC
AAATAAACCTCCAGTAACCT
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