DY260572

Overview
NameDY260572
Unique NameDY260572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1170
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.898e-33
Identity = 82/219 (37.44%), Postives = 121/219 (55.25%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYG 641
            KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L   VL+VGYG
Sbjct:   74 KFSDLSKDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYG 277          

HSP 2 Score: 27.335 bits (59), Expect = 5.898e-33
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  695 KNSWGENWGEDG 730
            KN+WG +WGE+G
Sbjct:  288 KNTWGTDWGEEG 299          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.008e-32
Identity = 69/181 (38.12%), Postives = 102/181 (56.35%), Query Frame = 3
Query:  108 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            +DLP   DWR++GAV  VK+QG CGSCW+FS   A+EG + + TG+L+SLSEQQLVDC          + + GC GG MN AF++I+  GG+  E+ YPY G D G C    +    ++ ++  + S  +Q     V + P++V ++A     Q Y  G+     C       + +VGYG+
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD-GICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTG-SCNISANHALTVVGYGT 170          

HSP 2 Score: 31.5722 bits (70), Expect = 1.008e-32
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG+NWGE G I
Sbjct:  180 KNSWGKNWGESGYI 193          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.319e-32
Identity = 93/249 (37.35%), Postives = 128/249 (51.41%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLN-RRLRL----PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            KF+D+T  EFR  + G   +  R+    P           + +P   DWR  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD +         + GCNGGLM+ AFE+I + GG+  E +YPY   D G+C   K    A ++     +  +++      V + P++V I+A     Q Y  GV     CG  L+ GV IVGYG++        G      K + G   GEK
Sbjct:   84 KFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-SCGTELDHGVAIVGYGTT------IDGTKYWTVKNSWGPEWGEK 316          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.710e-32
Identity = 70/179 (39.11%), Postives = 107/179 (59.78%), Query Frame = 3
Query:  114 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLESGVLIVGYGS 644
            LP+  DWR  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+YI+  GG++ +++YPY+    GSCK  + ++  +++ F  ++ + +    + V   P++V + A     Q Y  G+     CG     GV+IVGYG+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ-GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG-PCGTAQNHGVVIVGYGT 167          

HSP 2 Score: 28.8758 bits (63), Expect = 1.710e-32
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            +NSWG+NWG  G I
Sbjct:  177 RNSWGQNWGNQGYI 190          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.872e-32
Identity = 85/220 (38.64%), Postives = 116/220 (52.73%), Query Frame = 3
Query:    3 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LESGVLIVGYG 641
            +F+D++  EFR   LG  +                  LP   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     +   VL VGYG
Sbjct:  106 RFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYG 315          

HSP 2 Score: 27.7202 bits (60), Expect = 2.872e-32
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 2
Query:  695 KNSWGENWGEDGII-----*NLPGVAQVWGGPI 778
            KNSWG +WG++G        N+ GVA     PI
Sbjct:  326 KNSWGADWGDEGYFKMEMGKNMCGVATCASYPI 358          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.937e-32
Identity = 89/235 (37.87%), Postives = 121/235 (51.49%), Query Frame = 3
Query:   39 QFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            + + L   LR+P   Q+     +N    LP   DWR+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVDC      E+ G  + GCNGG M  AF+YI+   G++ E  YPY  TD   C++D    AA  S ++ +    ED +   +   GP+ VG++A       Y  GV     C + +  GVL++GYG          GK     K + G   GE+
Sbjct:   87 EVMSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS-----EKYG--NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGD-------LNGKEYWLVKNSWGSNFGEQ 306          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.746e-32
Identity = 87/218 (39.91%), Postives = 118/218 (54.13%), Query Frame = 3
Query:   12 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQT---YIGGVSCPYICGKYLESGVLIVGYGS 644
            D+TP E     +G    LR+P    ++  L ++    LP   DWR+ G VT VK QG+CGSCW+FSA GALEG   L TG+LVSLS Q LVDC  E   E+ G  + GC GG M  AF+YI+    ++ E  YPY   D   C +D    AA  S +  +   DE+ +   +   GP++VGI+     +   Y  GV     C + +  GVL+VGYG+
Sbjct:   80 DMTPEEV----IGYMGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE---EKYG--NKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMD-EKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT 286          

HSP 2 Score: 23.0978 bits (48), Expect = 3.746e-32
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG ++G+ G I
Sbjct:  296 KNSWGLHFGDQGYI 309          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.077e-31
Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYG 641
            P  FDWR    +T VKDQG CG+CW F++ GALE  + +    L+ LSEQQLVDCD           D GC+GGL+++A+E I+K GGVE+E DY Y   +   C     K A  V N +  +  +E+++   L   GP+A+ ++AV +  Y GG+   +     L   VL+VGYG
Sbjct:  127 PVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF---------VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYK-AERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGI-VSFCENNGLNHAVLLVGYG 291          

HSP 2 Score: 27.7202 bits (60), Expect = 1.077e-31
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG ++GEDG +
Sbjct:  302 KNSWGSDYGEDGYV 315          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 1.116e-31
Identity = 88/235 (37.45%), Postives = 123/235 (52.34%), Query Frame = 3
Query:   39 QFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLESGVLIVGYGSSGFPPIPFQGKTLLESKKTPGERTGEK 725
            + + L   LR+P+  Q+     +N    LP   DWR+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVD    C  E+ G  + GCNGG M +AF+YI+   G++ +  YPY   D   C++D    AA  S ++ +    ED +   +   GP++VG++A       Y  GV     C + +  GVL+VGYG          GK     K + G   GE+
Sbjct:   87 EVMSLMSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGD-------LNGKEYWLVKNSWGHNFGEE 307          
BLAST of DY260572 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.403e-31
Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = 3
Query:  117 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLESGVLIVGYG 641
            P +FDWR++  VT VKDQG CG+CW+F+  GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I+  GGVE+E DYPY       C     K A  V N +  +   E+++   L   GP+A+ ++AV +  Y GGV   +     L   VL+VGYG
Sbjct:  127 PANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAV-RLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGV-ISFCENNGLNHAVLLVGYG 291          

HSP 2 Score: 25.7942 bits (55), Expect = 1.403e-31
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  695 KNSWGENWGEDGII 736
            KNSWG ++GE+G +
Sbjct:  302 KNSWGSDYGENGYV 315          
The following BLAST results are available for this feature:
BLAST of DY260572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATV_NPVRO5.898e-3337.44Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CPGP2_ZINOF1.008e-3238.12Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_RICCO1.319e-3237.35Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
ERVB_TABDI1.710e-3239.11Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP2_MAIZE2.872e-3238.64Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATS_SAIBB2.937e-3237.87Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATS_RAT3.746e-3239.91Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_NPVSE1.077e-3140.34Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATS_HUMAN1.116e-3137.45Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATV_NPVMC1.403e-3140.91Viral cathepsin OS=Mamestra configurata nucleopoly... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260572 ID=DY260572; Name=DY260572; organism=Citrus clementina; type=EST; length=1170bp
CCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGC
TTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCTATTCT
CCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCCTACATTTGCG
GGAAGTATTTGGAATCTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGT
TTCCCCCCGATCCCGTTTCAAGGAAAAACCTTACTGGAATCTAAAAAAAC
TCCTGGGGAGAGAACTGGGGAGAAGATGGGATAATATAAAATCTGCCTGG
GGTCGCACAGGTCTGGGGGGGTCCAATCCAAGGGTCTCACCCGAATAGCG
CTGGCCCACACAACCCTAAATTTAAAACATTTACGAAGGTTGTGCCTGCG
CCAAGTGTATCCTCAACCACTAAAAAAATTCAACCAAATCCCCCTTCTAC
ACCCCCCTCCTTCAACATCTCACACCATCCCTACACCACCCGGGCCAGGG
CTGTTACCCATCTCACCAGCTCTCCACTCCAGTTAGAACACCCCACCCGA
GCCTACAATTCTACAATTTCACCTCCCTTTCCTCCCGAACGCCACCGCCC
TCGCGCCAACACTCATAAGGAGAACAAACGCGAATCACCAAAGACCCACC
ATCATTCAACAATGCGAAGCGCCACGCGAGAACATACAAATAAATAAACC
AAATAAACCTCCAGTAACCT
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