DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: STL1_YEAST (Sugar transporter STL1 OS=Saccharomyces cerevisiae GN=STL1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.687e-17
Identity = 67/228 (29.39%), Postives = 109/228 (47.81%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKR---RNRPQLVIAVALQIFQQCTGINAIMFYAPVLF-KTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +A    K  KH   +L  R   +N  + +IA + Q FQQ TG NA ++Y+ VLF KT+      S+    +   +  LST+ S + ++K+GRR L L       +S T+    L   VK++ E+   G AV + +    FI+ F  S   L W+ P E   ++ R++  + + C N L  F +       +    +G +LFF+    +    +FF  PET    +EE+
Sbjct:  265 DAVNRTKHEKHSLSSLFSRGRSQNLQRALIAASTQFFQQFTGCNAAIYYSTVLFNKTIKLDYRLSMIIGGVFATIYALSTIGSFFLIEKLGRRKLFLLGATGQAVSFTITFACL---VKENKENAR-GAAVGLFL----FITFFGLSLLSLPWIYPPEIASMKVRASTNAFSTCTNWLCNFAVVMFTPIFIGQSGWGCYLFFAVMNYLYIPVIFFFYPETAGRSLEEI 484          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.687e-17
Identity = 65/218 (29.82%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   58 RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLL--EAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWL 705
            R +R  L+IAV LQ+ QQ +GINA+ +Y+  +F+  G    A  Y+T+  G VN + TLVS+  V++ GRR L L   AG+        +A++L  +V   S         + ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +       +FL F+  +L    F F  +PET+    ++++    + P L
Sbjct:  282 RTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFELAGVEQPA--YATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPSMS--------YVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMGPYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISATFRRTPSL 489          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.687e-17
Identity = 64/230 (27.83%), Postives = 113/230 (49.13%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKR-RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTER 684
            E+ ++ +E K     L +    R  ++IA+ LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +       D     + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  ++ LC     +F+ F+  +++   F +F +PETK    +E+  R
Sbjct:  246 ESRQMMREKKVTIMELFRSPMYRQPILIAIVLQLSQQLSGINAVFYYSTSIFEKSGV--EQPVYATIGSGVVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTLL------DQMPWMSYLSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAFAVAGLSNWTSNFIVGMGFQYIAQLCGSY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIAYR 465          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.994e-17
Identity = 58/205 (28.29%), Postives = 100/205 (48.78%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYS-TVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  L++   +Q FQQ TGI+A ++Y+P + K  G      L + TV  G    +  L + + +D VGR+ LL  + I M L    ++  L    +       T    L ++ +C  ++ F+   GP+ W++ SE FPL  R+   ++    N + + ++A +FLS+       G F  FS    +   FV+ L+PET    +E++
Sbjct:  298 RKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQG------TLGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQI 496          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GHT4_SCHPO (High-affinity hexose transporter ght4 OS=Schizosaccharomyces pombe GN=ght4 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.994e-17
Identity = 60/210 (28.57%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV--KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCF-VFFLLPETKNVPIEEMTE 681
            R + V+     + ++  G N   +YA  +FK  G G +      VI GA+N  +T  ++Y++D +GRR  L+       +   + A +   K+  K+ + D   G   ++++  C F+ ++  SWGP+GW+I  ETFP+  RS   +V    N L  F+++    F+S    FK G   +    + + S F +F +  ETK + +EE+ E
Sbjct:  263 RYRTVLGFLTMLLRELIGNNYYFYYATQVFK--GTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAG--AVMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCAAVATSGNWLGNFMVSFFTPFISNSIGFKLG---YIYACINMTSAFQIFLMAKETKGLTLEEVNE 465          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL3_ARATH (Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.994e-17
Identity = 60/210 (28.57%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 NLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +L +RR  P +VI V L + QQ +G + +M+Y   +F     GG  S   ++I   + +   L+ +  V+K+GRR LLL +   M     +++     +     ++L   F  + V+    FIS+FA   G L W+I SE FP+  + +  ++    N  F +++A A+  ML     G FL F         F++ ++PETK   +E++
Sbjct:  258 DLFQRRYAPSVVIGVGLMLLQQLSGSSGLMYYVGSVFDK---GGFPSSIGSMILAVIMIPKALLGLILVEKMGRRPLLLASTGGMCFFSLLLSFSFCFRSYGMLDELTPIFTCIGVV---GFISSFAVGMGGLPWIIMSEIFPMNVKVSAGTLVTLANWSFGWIVAFAYNFMLEWNASGTFLIFFTICGAGIVFIYAMVPETKGRTLEDI 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.044e-16
Identity = 59/226 (26.11%), Postives = 108/226 (47.79%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFA-VLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            V    + ++ K  F ++ +++ R  LV+ + L + QQ +G + I +Y+  +F+  GF   +    ++I G   +   LV +  VD+ GRR LLL + + M +     ++++G+       +L   F  V V I I  +   FA   G L W+I SE FP+  + +  S+    +    + ++  F  M      G F  F+    +   F++ L+PETK   +EE+
Sbjct:  232 VMTKMLEEDSKSSFCDMFQKKYRRTLVVGIGLMLIQQLSGASGITYYSNAIFRKAGF---SERLGSMIFGVFVIPKALVGLILVDRWGRRPLLLASAVGMSIG----SLLIGVSFTLQEMNLFPEFIPVFVFINILVYFGFFAIGIGGLPWIIMSEIFPINIKVSAGSIVALTSWTTGWFVSYGFNFMFEWSAQGTFYIFAMVGGLSLLFIWMLVPETKGQSLEEL 450          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.781e-16
Identity = 57/207 (27.54%), Postives = 103/207 (49.76%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTG----FAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            L++A  LQ  QQ +G N++M+++  +F+ +GF    +  + +I  A N + T+V+   +D  GRR+LLL     M  +  V A+      KD + +  +G    +A++V+I +  +++++A   G L W   SE FP+  R  G  ++  VN      I  +FL+++      G F  + G   +      F  P+  +  IEE+ E
Sbjct:  339 LILACGLQAMQQLSGFNSLMYFSSTIFEVVGFNNPTA--TGLIIAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASGLGNLPWQ-QSELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPTGTFALYGGLCFLGWLGALFCYPDLTDYTIEEIGE 542          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.326e-16
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  134 DVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 361          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.326e-16
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  236 DVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
STL1_YEAST4.687e-1729.39Sugar transporter STL1 OS=Saccharomyces cerevisiae... [more]
GTR4_RAT4.687e-1729.82Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK4.687e-1727.83Solute carrier family 2, facilitated glucose trans... [more]
PLT4_ARATH7.994e-1728.29Probable polyol transporter 4 OS=Arabidopsis thali... [more]
GHT4_SCHPO7.994e-1728.57High-affinity hexose transporter ght4 OS=Schizosac... [more]
ERDL3_ARATH7.994e-1728.57Sugar transporter ERD6-like 3 OS=Arabidopsis thali... [more]
EDL10_ARATH1.044e-1626.11Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
ITR1_SCHPO1.781e-1627.54Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
GTR1_SHEEP2.326e-1627.31Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT2.326e-1627.31Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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