DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.326e-16
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  195 DVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 422          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.038e-16
Identity = 63/238 (26.47%), Postives = 114/238 (47.90%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +       +     + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  236 DVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALL------ERLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.968e-16
Identity = 64/238 (26.89%), Postives = 114/238 (47.90%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++ AV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  236 DVTRDLQEMKEESRQMMREKKVTILELFRSPAYRQPILSAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.968e-16
Identity = 63/238 (26.47%), Postives = 114/238 (47.90%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN------------RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +R  +E+K   R +++ +             R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +       +     + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  236 DVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALL------ERLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.968e-16
Identity = 63/225 (28.00%), Postives = 103/225 (45.78%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            VEAS+    +    R+L ++R   QL I + L + QQ  G   I  Y   LFK  GF     +   ++   + V  +L+ +  VD+ GRR LL+ + + + LS   +A+  G+K       +     +   I I +F   FA   G L W+I SE FP++ +    S+    N    ++   AF  ML     G F+  +        F + L+PET+ + +EE+
Sbjct:  239 VEASKKNSNIN--IRSLFEKRYAHQLTIGIGLMLLQQLCGTAGISSYGSTLFKLAGFPARIGM---MVLSLIVVPKSLMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFGVK---DVPGIGKITPIFCFIGILSFTMMFAIGMGALPWIIMSEIFPMDIKVLAGSLVTIANWFTGWIANYAFNFMLVWSPSGTFIISAIICGATIVFTWCLVPETRRLTLEEI 455          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 5.182e-16
Identity = 61/233 (26.18%), Postives = 106/233 (45.49%), Query Frame = 1
Query:    4 EASRIAKEVKHP---------FRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            EA+ I +  KH          F  L +R+    L I V L    Q  G+N   FY   +F + G          ++T  V +   ++ +  VD  GRR LLL +   MFL     AI   ++  +  E   TG  ++ +I +  +  ++    GP+ W+I SE +P++ + A  +V   V  + ++++  +F  +L     G F+ F+  + +   F   L+PETK   +EE+
Sbjct:  241 EAATILEYTKHVEQQDIDSRGFFKLFQRKYALPLTIGVVLISMPQLGGLNGYTFYTDTIFTSTGVSSDIGF---ILTSIVQMTGGVLGVLLVDISGRRSLLLFSQAGMFLGCLATAISFFLQKNNCWE---TGTPIMALISVMVYFGSYGLGMGPIPWIIASEIYPVDVKGAAGTVCNLVTSISSWLVTYSFNFLLQWSSTGTFMMFATVMGLGFVFTAKLVPETKGKSLEEI 467          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR6_HUMAN (Solute carrier family 2, facilitated glucose transporter member 6 OS=Homo sapiens GN=SLC2A6 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.768e-16
Identity = 59/224 (26.34%), Postives = 104/224 (46.43%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLY----STVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFA-----------------VLVVIMICT--FISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGI-FLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            + +A+ +++ QQ TGI  I+ Y   +F +     +A L        I GAV +LS L++  ++D  GR++LL  +   MF +   + + +    +  S +   G                   + +V ++ T  FI  +A  WGP+ WL+ SE  PL  R     + V  + L  FV+ ++FL ++  F   + F FF+   L+   F    +PETK   +E++
Sbjct:  276 ITVALLMRLLQQLTGITPILVYLQSIFDS-----TAVLLPPKDDAAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQI 494          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.768e-16
Identity = 57/206 (27.67%), Postives = 102/206 (49.51%), Query Frame = 1
Query:   58 RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  R Q++  + L   QQ +G+NAI +YA  ++ + G       Y TV TGAVNVL T+ +++ V+ +GRR LLL      F++  V+ + L +      +D  +    + ++ + +++   A    P+  L+ +E F   +RSA   V   V+ L  F +   F  +        F+ F+   L+ + ++F ++PETK     E+
Sbjct:  272 RSLRWQVISIIILMGGQQLSGVNAIYYYADQIYLSAGVKDQDVQYVTVGTGAVNVLMTICAVFVVEYLGRRALLLLGFSVCFIACCVLTVALAL------QDRVSWMPYISIVCVISYVIGHALGPSPIPALLITEVFLQSSRSAAYMVGGTVHWLSNFAVGLVFPFIQVGLGAYSFIIFAVICLLTTIYIFLIVPETKGKTFVEI 471          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.768e-16
Identity = 61/205 (29.76%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC     +F+ F+  +++   F +F +PETK    +E+
Sbjct:  269 RQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPY--VFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GHT8_SCHPO (Probable high-affinity hexose transporter ght8, mitochondrial OS=Schizosaccharomyces pombe GN=ght8 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.839e-16
Identity = 62/218 (28.44%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV-KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK--PPWL 705
            R +  + + +   QQ TG N   +Y   +F+  G G ++   S +I  AVN   T   ++ ++  GRRM L+  G+   ++  + A +    + + +    H   AV++V   C FI +FA +WGP  ++I  E++P+  RS   +V    N L+ F+I     F+S    FK+G    F+   L  +C +F    ETK + +EE+ E       PW+
Sbjct:  263 RYRTFLGLGVMSLQQLTGDNYYFYYGFEVFE--GTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGGVWQSITFFIYAAVGNRALTRKNGTSNHRAGAVMIVFS-CLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTGNWLWGFLITFFTPFISDSIGFKYG--YIFAACNLCAACIIFLFAHETKGLTLEEINELYLSGAKPWM 475          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
GTR1_PIG2.326e-1627.31Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN3.038e-1626.47Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT3.968e-1626.89Solute carrier family 2, facilitated glucose trans... [more]
GTR1_MOUSE3.968e-1626.47Solute carrier family 2, facilitated glucose trans... [more]
EDL12_ARATH3.968e-1628.00Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]
EDL14_ARATH5.182e-1626.18Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
GTR6_HUMAN6.768e-1626.34Solute carrier family 2, facilitated glucose trans... [more]
GTR5_HORSE6.768e-1627.67Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN6.768e-1629.76Solute carrier family 2, facilitated glucose trans... [more]
GHT8_SCHPO8.839e-1628.44Probable high-affinity hexose transporter ght8, mi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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