DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR5_MOUSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Mus musculus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.560e-12
Identity = 50/196 (25.51%), Postives = 92/196 (46.94%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETK 654
            R QL+  + L   QQ +G+NAI +YA  ++ + G       Y T  TGAVNV  T+++I+ V+  GRR LLL       ++  V+   L +      ++  +    + ++ +  ++   A    P+  L+ +E F   +R A   +   V+ L  F +   F  +        F+ F+    + + ++F ++PETK
Sbjct:  274 RWQLISMIVLMAGQQLSGVNAIYYYADQIYLSAGVKSDDVQYVTAGTGAVNVFMTILTIFVVELWGRRFLLLVGFSTCLIACLVLTAALAL------QNTISWMPYISIVCVIVYVIGHALGPSPIPALLITEIFLQSSRPAAYMIGGSVHWLSNFTVGLIFPFIQMGLGPYSFIIFATICFLTTIYIFMVVPETK 463          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR5_HUMAN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Homo sapiens GN=SLC2A5 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.929e-12
Identity = 52/199 (26.13%), Postives = 96/199 (48.24%), Query Frame = 1
Query:   58 RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETK 654
            R  R QL+  + L   QQ +G+NAI +YA  ++ + G       Y T  TGAVNV+ T  +++ V+ +GRR+LLL       ++  V+   L +      +D  +    + ++ + +++   A    P+  L+ +E F   +R +   V   V+ L  F +   F  +        F+ F+   L+ + ++F ++PETK
Sbjct:  272 RSLRWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPEEHVQYVTAGTGAVNVVMTFCAVFVVELLGRRLLLLLGFSICLIACCVLTAALAL------QDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETK 464          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.011e-11
Identity = 61/213 (28.64%), Postives = 102/213 (47.89%), Query Frame = 1
Query:   49 LLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDL-HTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG---IFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            LL  R+   + I   L   QQ +GINA+ +++  +FK+ G     S    +  G  N+L +++++  +DKVGR++LLL + I M       A  + ++V   S  L H     L V     F+  FA   GP+  L+  E FP   R+   +  + V+ +  F +   FL +L   K G   ++  FS + L+   FV   + ETK   ++E+
Sbjct:  285 LLYGRHSRVVFIGSTLFALQQLSGINAVFYFSSTVFKSAGV---PSDLGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGM-------AAAMALQVGATSSYLPHFSALCLSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLL--EKLGPRLLYSMFSTFCLMAVMFVKRNVIETKGKTLQEI 485          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.253e-11
Identity = 51/199 (25.63%), Postives = 96/199 (48.24%), Query Frame = 1
Query:   58 RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETK 654
            R  R QL+  + L   QQ +G+NAI +YA  ++ + G       + T  TGAVNV+ T  +++ V+ +GRR+LLL       ++  V+   L +      +D  +    + ++ + +++   A    P+  L+ +E F   +R +   V   V+ L  F +   F  +        F+ F+   L+ + ++F ++PETK
Sbjct:  272 RSLRWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPKEHVQFVTAGTGAVNVVMTFCAVFVVELLGRRLLLLLGFSICLVACCVLTAALAL------QDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETK 464          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR9_PONAB (Solute carrier family 2, facilitated glucose transporter member 9 OS=Pongo abelii GN=SLC2A9 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 52/205 (25.37%), Postives = 90/205 (43.90%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            R Q+V  +      Q  G+NAI FY   +F   G   +   Y T+ TG +  L+ + S   ++ +GRR LL+     M L    + + L +      +D       L ++ I   I++F    G + +++  E F    R A   +   VN L  F +   F  +        FL F+   +  + +++F+LPETKN    E+++
Sbjct:  313 RWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGIPPAKIPYVTLSTGGIETLAAIFSGLVIEHLGRRPLLIGGFGLMALFFGTLTVTLTL------QDRAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDTYCFLVFATICMTGAIYLYFVLPETKNRTYAEISQ 511          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
GTR5_MOUSE1.560e-1225.51Solute carrier family 2, facilitated glucose trans... [more]
GTR5_HUMAN5.929e-1226.13Solute carrier family 2, facilitated glucose trans... [more]
PLST2_ARATH1.011e-1128.64Probable plastidic glucose transporter 2 OS=Arabid... [more]
GTR5_PONAB2.253e-1125.63Solute carrier family 2, facilitated glucose trans... [more]
GTR9_PONAB8.561e-1125.37Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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