DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 2.242e-27
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   79 VIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIA---------------IILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFK-FGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            +I V+L  FQQ +G+NA+MFYA  +F+   F  S+   ++V+ G + VL T V+   +D+ GRR+LL+ +G+ M  S +                  + +   V     D   G A L V  +C FI+ FA  WGP+ WL+ SE FPL  +     + V  N L  F++ + F S++   + +G F   S + +    F  F +PETK   +E++T
Sbjct:  258 IIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKDSS--LASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQIT 471          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.454e-26
Identity = 73/224 (32.59%), Postives = 124/224 (55.36%), Query Frame = 1
Query:   16 IAKEVKHPFRNLLKRRNR--PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICT-FISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG-IFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            ++ + K  F +LL RR    P + I + L   QQ  GIN I +Y+ VL++++GF    SL  TVITG +N+L+TLV+I  VDK GR+ LLL   I M ++  +++++ G     + +   TG A ++ ++    ++ +F +SWGP+ W++  E F  + R+A  SV   V  +  F+I+  F  +L     G  +  ++    I   F++F + ETK   +E+M
Sbjct:  245 VSLDHKPRFSDLLSRRGGLLPIVWIGMGLSALQQFVGINVIFYYSSVLWRSVGFTEEKSLLITVITGFINILTTLVAIAFVDKFGRKPLLLMGSIGMTITLGILSVVFGGATVVNGQPTLTGAAGIIALVTANLYVFSFGFSWGPIVWVLLGEMFNNKIRAAALSVAAGVQWIANFIISTTFPPLLDTVGLGPAYGLYATSAAISIFFIWFFVKETKGKTLEQM 468          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.238e-26
Identity = 68/217 (31.34%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIA---------------IILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFK-FGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            L+I + L +FQQ +G+NAIMFYA  +F+   F  S+   ++V  G + VL T V+   +D+ GR++LL  +G+ M  S +                  + L + +     D+H G A L V  +C FI+ FA  WGP+ WL+ SE FPL  +     V V  N    F++ + F S++   + +G F   + + ++   F    +PETK   +E++T
Sbjct:  258 LIIGICLMVFQQLSGVNAIMFYANTIFEEAKFKDSS--LASVTVGIIQVLFTAVAALIMDRAGRKLLLALSGVIMVFSMSAFGTYFKLTQSGPSNSSHVGLLVPISAEPADVHLGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHIKGVATGVCVLTNWFMAFLVTKEFNSIMEILRPYGAFWLTAAFCILSVLFTLTFVPETKGRTLEQIT 472          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.580e-25
Identity = 75/245 (30.61%), Postives = 124/245 (50.61%), Query Frame = 1
Query:    1 VEASRIA--KEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV----KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFV--IAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP---PW 702
            VEA R+A    +K  F    K   R  L++ + +Q FQQ TG N   +Y   +F ++G   S    ++++ G VN  ST V+IY VDK GRR  LL     M     V A +   ++     +H E    G    +++  C +I  FA SW P+ +++ +E++PL  ++   ++    N ++ F+      F++   HF +G    F G ++ M  +VFF +PETK + +EE+ E +W+    PW
Sbjct:  297 VEAERLAGSASIKELFSTKTKVFQR--LIMGMLIQSFQQLTGNNYFFYYGTTIFNSVGMDDSFE--TSIVLGIVNFASTFVAIYVVDKFGRRKCLLWGAAAMTACMVVFASVGVTRLWPDGANHPETASKGAGNCMIVFACFYIFCFATSWAPIAYVVVAESYPLRVKAKCMAIATASNWIWGFLNGFFTPFITSAIHFYYG--YVFMGCLVAMFFYVFFFVPETKGLTLEEVQE-MWEEGVLPW 534          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT8_YEAST (Hexose transporter HXT8 OS=Saccharomyces cerevisiae GN=HXT8 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.580e-25
Identity = 77/249 (30.92%), Postives = 125/249 (50.20%), Query Frame = 1
Query:   40 FRNLLKRRNR--PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDH--SEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP---PWLWKNFMVDHGFDDDEPKKK 759
            ++ L  R+ +   +L + V +   QQ TG N   +Y   +FK++G   S    ++++ G VN  S   S+YSVDK+GRR  LL     M     + A +   ++  +  SE    G     ++  C +I  F+ +WGP+ ++I SETFPL  RS   SV    NLL+ F+I     F++   +F +G    F G +     +VFF +PETK + +EE+ E +W     PW  ++++     D D   +K
Sbjct:  313 WKELFSRKTKVFQRLTMTVMINSLQQLTGDNYFFYYGTTIFKSVGMNDSFE--TSIVLGIVNFASCFFSLYSVDKLGRRRCLLLGAATMTACMVIYASVGVTRLYPNGKSEPSSKGAGNCTIVFTCFYIFCFSCTWGPVCYVIISETFPLRVRSKCMSVATAANLLWGFLIGFFTPFITSAINFYYG--YVFMGCLAFSYFYVFFFVPETKGLTLEEVDE-MWMDGVLPWKSESWVPASRRDGDYDNEK 556          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.580e-25
Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILG--------------IKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFK-FGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            L+I ++L +FQQ +G+NAIMFYA  +F+   F  S+   ++V  G + VL T V+   +D+ GRR+LL  +G+ M  S +                     + +     D+  G A L V  +C FI+ FA  WGP+ WL+ SE FPL  +     + V  N    F++ + F S++   + +G F   + +  +   F   ++PETK   +E++T
Sbjct:  258 LIIGISLMVFQQLSGVNAIMFYANSIFEEAKFKDSS--LASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVT 471          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.580e-25
Identity = 67/216 (31.02%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   79 VIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIA---------------IILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFK-FGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            +I ++L  FQQ +G+NA+MFYA  +F+   F  S+   ++V+ G + VL T  +   +D+ GRR+LL  +G+ M  S +                  + L   V   + D + G A L V  +C FI+ FA  WGP+ WL+ SE FPL  +     V V  N    F++ + F S++   + +G F   S + +    F    +PETK   +E++T
Sbjct:  259 IIGISLMAFQQLSGVNAVMFYAETIFEEAKFKDSS--LASVVVGVIQVLFTATAALIMDRAGRRLLLTLSGVVMVFSTSAFGTYFKLTEGGPSNSSHVDLPALVSMEAADTNVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGVCVLTNWFMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFGVLFTLACVPETKGKTLEQIT 472          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.107e-25
Identity = 71/206 (34.47%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG-IFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            RP L+  + L   QQ  G N I++YAP  F  +GFG SAS+  TV  G VNVL TLV+I  +DK+GR+ LLL     M +S  V+A++      +   D     +   VI +  FI  FA SWGP+ W++  E FPL  R  G  V+  +  + T +++  +  ++       +FL ++   ++   FV F + ETK   +EE+ +
Sbjct:  238 RPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGFGNSASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALV------NLFFDNTPAASWTTVICLGVFIVVFAVSWGPVVWVMLPELFPLHVRGIGTGVSTLMLHVGTLIVSLTYPILMEAIGISYLFLIYAAIGIMAFLFVRFKVTETKGRSLEEIEQ 437          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 6.107e-25
Identity = 66/204 (32.35%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG-IFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            RP L+I V L IFQQ  GIN +++YAP +F   G G SAS   T+  G +NV+  + ++  +D+VGR+ LL+   + + LS   +A + G+ +   +  L    A + V+ +  +I  +  +WGP+ W++  E FP + R A    T  V      +++  F  ML       +F+ FS   L+   F F+++PETK   +EE+
Sbjct:  240 RPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASALGTMGIGILNVIMCITAMILIDRVGRKKLLIWGSVGITLS---LAALSGVLL---TLGLSASTAWMTVVFLGVYIVFYQATWGPVVWVLMPELFPSKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEI 437          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.976e-25
Identity = 70/226 (30.97%), Postives = 118/226 (52.21%), Query Frame = 1
Query:   19 AKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-------KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            AK V   +  L  +  RP L+I + L IFQQ  G N +++YAP +F  +GFG SA+L + +  G  NV+ T +++  +DK+ R+ ++    + M +S  V++I  G+K    S+      A++ VI +  +I+ F+ +WGP+ W++  E FPL  R  G S    +N     +++  F S+L  F        +GI  F S W +    F      ET+N  +E++
Sbjct:  225 AKIVSGGWSELFGKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSI--GMKFSGGSQTA----AIISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVF------ETRNRSLEDI 438          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
GTR8_HUMAN2.242e-2731.94Solute carrier family 2, facilitated glucose trans... [more]
GLCP_SYNY31.454e-2632.59Glucose transport protein OS=Synechocystis sp. (st... [more]
GTR8_RAT3.238e-2631.34Solute carrier family 2, facilitated glucose trans... [more]
KHT2_KLULA3.580e-2530.61Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
HXT8_YEAST3.580e-2530.92Hexose transporter HXT8 OS=Saccharomyces cerevisia... [more]
GTR8_MOUSE3.580e-2530.56Solute carrier family 2, facilitated glucose trans... [more]
GTR8_BOVIN3.580e-2531.02Solute carrier family 2, facilitated glucose trans... [more]
YWTG_BACSU6.107e-2534.47Putative metabolite transport protein ywtG OS=Baci... [more]
CSBC_BACSU6.107e-2532.35Probable metabolite transport protein csbC OS=Baci... [more]
XYLT_LACBR7.976e-2530.97D-xylose-proton symporter OS=Lactobacillus brevis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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