DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.976e-25
Identity = 72/247 (29.15%), Postives = 124/247 (50.20%), Query Frame = 1
Query:    7 ASRIAKEVKHPFRNLLKRRNR------PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSM------LCHFKFGIFLFFSGWV-----LIMSCFVFFLLPETKNVPIEEMTERVWKP 696
            A++  +E+KH   +  K   R        +VI V L IFQQ  GIN +++YAP +FKTLG     +L  T+I G +N+  T+++I +VDK GR+ L +   + M +    +      +             ++ ++ +  +++AFA SWGP+ W++ SE FP   R    ++ V    L  + ++  F  M      + HF  G    FS W+     ++ + F++  +PETK   +EE+ E +W+P
Sbjct:  249 ATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP----------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNG----FSYWIYGCMGVLAALFMWKFVPETKGKTLEEL-EALWEP 480          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.976e-25
Identity = 72/247 (29.15%), Postives = 124/247 (50.20%), Query Frame = 1
Query:    7 ASRIAKEVKHPFRNLLKRRNR------PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSM------LCHFKFGIFLFFSGWV-----LIMSCFVFFLLPETKNVPIEEMTERVWKP 696
            A++  +E+KH   +  K   R        +VI V L IFQQ  GIN +++YAP +FKTLG     +L  T+I G +N+  T+++I +VDK GR+ L +   + M +    +      +             ++ ++ +  +++AFA SWGP+ W++ SE FP   R    ++ V    L  + ++  F  M      + HF  G    FS W+     ++ + F++  +PETK   +EE+ E +W+P
Sbjct:  249 ATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP----------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNG----FSYWIYGCMGVLAALFMWKFVPETKGKTLEEL-EALWEP 480          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GAL2_YEAST (Galactose transporter OS=Saccharomyces cerevisiae GN=GAL2 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 7.976e-25
Identity = 70/241 (29.05%), Postives = 126/241 (52.28%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDH--SEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP---PW 702
            +EA ++A           K +   +L++ V +Q+FQQ TG N   +Y  V+FK++G   S    ++++ G VN  ST  S+++V+ +G R  LL     M     + A +   ++  H  S+    G    +++  C +I  +A +W P+ W+I +E+FPL  +S   ++    N ++ F+IA    F++   +F +G    F G ++ M  +VFF +PETK + +EE+ E +W+    PW
Sbjct:  306 IEAEKLAGNASWGELFSTKTKVFQRLLMGVFVQMFQQLTGNNYFFYYGTVIFKSVGLDDSFE--TSIVIGVVNFASTFFSLWTVENLGHRKCLLLGAATMMACMVIYASVGVTRLYPHGKSQPSSKGAGNCMIVFTCFYIFCYATTWAPVAWVITAESFPLRVKSKCMALASASNWVWGFLIAFFTPFITSAINFYYG--YVFMGCLVAMFFYVFFFVPETKGLSLEEIQE-LWEEGVLPW 541          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.958e-24
Identity = 69/202 (34.16%), Postives = 105/202 (51.98%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGG-SASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            L+  + +   QQ +GI+A++ Y+P +F   G    +  L +TV  G V  L  +V    VD+ GRR LLL +   MFLS T +   L +  ++  + L      L V  + TF++ F+   GP+ W+  SE FP+  R+ G S+ V +N L + +I   FLS+       G FL F+G       F F  LPET+ +P+EEM
Sbjct:  285 LIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIG-LAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEM 485          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT15_YEAST (Hexose transporter HXT15 OS=Saccharomyces cerevisiae GN=HXT15 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.958e-24
Identity = 65/213 (30.52%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSED--LHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +K +   +L+  + +Q F Q TG N   FY   +FK++G   +    ++++ G VN  ST++++  VDK+GRR  LL     M     + A I G+K +  H +D     G    +++  C +I  FA +W P+ +++ +E+FP + +S   S++   N L+ F+I     F++   HF +G    F G ++ M  +VFF LPET  + +EE+
Sbjct:  313 VKTKVLQRLITGILVQTFLQLTGENYFFFYGTTIFKSVGL--TDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAASMMACMVIFASI-GVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSKAMSISTAFNWLWQFLIGFFTPFITGSIHFYYG--YVFVGCLVAMFLYVFFFLPETIGLSLEEI 520          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT16_YEAST (Hexose transporter HXT16 OS=Saccharomyces cerevisiae GN=HXT16 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.170e-24
Identity = 65/212 (30.66%), Postives = 113/212 (53.30%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSED--LHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEE 672
            +K +   +L+  + +Q F Q TG N   FY   +FK++G   +    ++++ G VN  ST++++  VDK+GRR  LL     M     + A I G+K +  H +D     G    +++  C +I  FA +W P+ +++ +E+FP + +S   S++   N L+ F+I     F++   HF +G    F G ++ M  +VFF LPET  + +EE
Sbjct:  313 VKTKVLQRLITGILVQTFLQLTGENYFFFYGTTIFKSVGL--TDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAASMMACMVIFASI-GVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSKAMSISTAFNWLWQFLIGFFTPFITGSIHFYYG--YVFVGCLVAMFLYVFFFLPETIGLSLEE 519          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.752e-24
Identity = 68/202 (33.66%), Postives = 105/202 (51.98%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGG-SASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            L+  + +   QQ +GI+A++ Y+P +F   G    +  L +TV  G V  L  +V    VD+ GRR LLL +   MF S T +   L +  ++  + L      L V  + TF++ F+   GP+ W+  SE FP+  R+ G S+ V +N L + +I   FLS+       G FL F+G  +    F F  LPET+ VP+EE+
Sbjct:  285 LIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIG-LAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGVPLEEI 485          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT17_YEAST (Hexose transporter HXT17 OS=Saccharomyces cerevisiae GN=HXT17 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.752e-24
Identity = 65/213 (30.52%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSED--LHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +K +   +L+  + +Q F Q TG N   FY   +FK++G   +    ++++ G VN  ST++++  VDK+GRR  LL     M     + A I G+K +  H +D     G    +++  C +I  FA +W P+ +++ +E+FP + +S   S++   N L+ F+I     F++   HF +G    F G ++ M  +VFF LPET  + +EE+
Sbjct:  310 VKTKVLQRLITGILVQTFLQLTGENYFFFYGTTIFKSVGL--TDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASI-GVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLIGFFTPFITGSIHFYYG--YVFVGCLVAMFLYVFFFLPETIGLSLEEI 517          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT13_YEAST (Hexose transporter HXT13 OS=Saccharomyces cerevisiae GN=HXT13 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.752e-24
Identity = 65/213 (30.52%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSED--LHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +K +   +L+  + +Q F Q TG N   FY   +FK++G   +    ++++ G VN  ST++++  VDK+GRR  LL     M     + A I G+K +  H +D     G    +++  C +I  FA +W P+ +++ +E+FP + +S   S++   N L+ F+I     F++   HF +G    F G ++ M  +VFF LPET  + +EE+
Sbjct:  310 VKTKVLQRLITGILVQTFLQLTGENYFFFYGTTIFKSVGL--TDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASI-GVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLIGFFTPFITGSIHFYYG--YVFVGCLVAMFLYVFFFLPETIGLSLEEI 517          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 8.818e-24
Identity = 76/232 (32.76%), Postives = 120/232 (51.72%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRN---RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSM-LCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            V+ SR     +  +R LL R     R  ++ A+ +  FQQ +GI+A++ ++P +FKT G       L +TV  G V     LV+ + +D++GRR LLL +   M LS  + A+   + + D SE       V+ +  + T+++ F+   GP+ W+  SE FPL  RS G S+ V VN + + VI+ +FL M       G F  F G   +   F +  LPET+   +E+M E
Sbjct:  267 VQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLS--LAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDE 496          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
XYLE_ECOLI7.976e-2529.15D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO577.976e-2529.15D-xylose-proton symporter OS=Escherichia coli O157... [more]
GAL2_YEAST7.976e-2529.05Galactose transporter OS=Saccharomyces cerevisiae ... [more]
PLT1_ARATH3.958e-2434.16Putative polyol transporter 1 OS=Arabidopsis thali... [more]
HXT15_YEAST3.958e-2430.52Hexose transporter HXT15 OS=Saccharomyces cerevisi... [more]
HXT16_YEAST5.170e-2430.66Hexose transporter HXT16 OS=Saccharomyces cerevisi... [more]
PLT2_ARATH6.752e-2433.66Putative polyol transporter 2 OS=Arabidopsis thali... [more]
HXT17_YEAST6.752e-2430.52Hexose transporter HXT17 OS=Saccharomyces cerevisi... [more]
HXT13_YEAST6.752e-2430.52Hexose transporter HXT13 OS=Saccharomyces cerevisi... [more]
PLT5_ARATH8.818e-2432.76Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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