DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.152e-23
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLY-STVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAV-LVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            L+ AV +  F+  TGI A++ Y+P +FK  G      L  +TV  G       +++ + +DKVGRR LLL +   M  + T +A+ L +  +         +A+ L ++    F++ F+   GP+ W+  SE FPL  R+ G S+ V VN +    ++ +FLSM       G+F  F+G  +    F FF+LPETK +P+EEM
Sbjct:  281 LIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFG----RLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEM 479          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.504e-23
Identity = 67/226 (29.65%), Postives = 120/226 (53.10%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++R+A+E +     L + R+ R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L +     M +   ++ I L +K      D +   + + +  I  F++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+G++++   F FF +PET+    EE+T
Sbjct:  245 ESARMAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGV--EEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLK------DNYNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLGAYVFIIFTGFLIVFLVFTFFKVPETRGRTFEEIT 462          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT7_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT7 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.965e-23
Identity = 71/241 (29.46%), Postives = 120/241 (49.79%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP---PW 702
            VEA ++A           K +   +L++   +Q  QQ TG N   +Y   +FK +G   S S  ++++ G VN  ST V IY V++ GRR  LL     M     V A +   ++  + +D  +  G    +++  C +I  FA +W P+ +++ SETFPL  +S   S+    N L+ F+I     F++   +F +G    F G ++ M  +V  ++PETK + +EE+   +W+    PW
Sbjct:  300 VEAEKLAGNASWGELFSSKTKVLQRLIMGAMIQSLQQLTGDNYFFYYGTTIFKAVGL--SDSFETSIVLGIVNFASTFVGIYVVERYGRRTCLLWGAASMTACMVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIPYVVVSETFPLRVKSKAMSIATAANWLWGFLIGFFTPFITGAINFYYG--YVFMGCLVFMFFYVLLVVPETKGLTLEEV-NTMWEEGVLPW 535          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT6_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT6 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.965e-23
Identity = 71/241 (29.46%), Postives = 120/241 (49.79%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP---PW 702
            VEA ++A           K +   +L++   +Q  QQ TG N   +Y   +FK +G   S S  ++++ G VN  ST V IY V++ GRR  LL     M     V A +   ++  + +D  +  G    +++  C +I  FA +W P+ +++ SETFPL  +S   S+    N L+ F+I     F++   +F +G    F G ++ M  +V  ++PETK + +EE+   +W+    PW
Sbjct:  300 VEAEKLAGNASWGELFSSKTKVLQRLIMGAMIQSLQQLTGDNYFFYYGTTIFKAVGL--SDSFETSIVLGIVNFASTFVGIYVVERYGRRTCLLWGAASMTACMVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIPYVVVSETFPLRVKSKAMSIATAANWLWGFLIGFFTPFITGAINFYYG--YVFMGCLVFMFFYVLLVVPETKGLTLEEV-NTMWEEGVLPW 535          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT3_YEAST (Low-affinity glucose transporter HXT3 OS=Saccharomyces cerevisiae GN=HXT3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.965e-23
Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = 1
Query:   79 VIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWK------------NFMVDHGFDDDEP 750
            ++ + +Q  QQ TG N   +Y   +F  +G   S S  ++++ G VN  ST  S+Y+VD+ GRR  LL   I M     V A +   ++  + E   +  G    +++  C +I  FA +W P+ +++ SETFPL  +S   S+    N L+ F+I     F++   +F +G    F G ++    +VFF +PETK + +EE+ +   +    WK            N+  D    DD+P
Sbjct:  323 MMGIMIQSLQQLTGDNYFFYYGTTVFNAVGM--SDSFETSIVFGVVNFFSTCCSLYTVDRFGRRNCLLYGAIGMVCCYVVYASVGVTRLWPNGEGNGSSKGAGNCMIVFACFYIFCFATTWAPIAYVVISETFPLRVKSKAMSIATAANWLWGFLIGFFTPFITGAINFYYG--YVFMGCMVFAYFYVFFFVPETKGLTLEEVNDMYAEGVLPWKSASWVPTSQRGANYDADALMHDDQP 558          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.965e-23
Identity = 62/219 (28.31%), Postives = 115/219 (52.51%), Query Frame = 1
Query:   70 PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAV--LVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKN 714
            P++++ + +Q  QQ TG N   +Y   +F  +G     S  ++++ GAVN  ST V++Y VDK GRR  LL     M +   + A +   ++    +D  +  +   ++++  C FI +FA +W P+ ++I +ET+PL  ++   ++ V  N ++ F+I     F++    F +G    F G ++    +VFF + ETK + +EE+ E   +    WK+
Sbjct:  307 PRVIMGIVIQSLQQLTGCNYFFYYGTTIFNAVGM--QDSFETSIVLGAVNFASTFVALYIVDKFGRRKCLLWGSASMAICFVIFATVGVTRLWPQGKDQPSSQSAGNVMIVFTCFFIFSFAITWAPIAYVIVAETYPLRVKNRAMAIAVGANWMWGFLIGFFTPFITRSIGFSYG--YVFMGCLIFSYFYVFFFVCETKGLTLEEVNEMYEERIKPWKS 521          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.566e-23
Identity = 66/227 (29.07%), Postives = 121/227 (53.30%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRML-LLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++R+++E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + TL+S++ V++ GRR L ++  G   F S  +   +L   +K+H    + G + + +  I  F++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+G+++    F FF +PET+    E++T
Sbjct:  269 ESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--QQPIYATISAGVVNTIFTLLSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLL---LKNH----YNGMSFVCIGAILVFVACFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDIT 486          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.566e-23
Identity = 71/217 (32.72%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   49 LLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGI-FLFFSGWVLIMSCFVFF--LLPETKNVPIEEMTERVW 690
            L K   R  LVI + L +F Q  G+NAI +Y P +FK +GFG +A   +T I G V V+ T++++  +DKVGR+ L       M +    +AI + +       +L +G  ++++++I  F++AF  S GP+ W++ SE FP   R+    +         + I Q F+ M+    FG+ + F+   V+ + CF+F   + PETKN  +EE+ E++W
Sbjct:  258 LFKPGLRKALVIGILLALFNQVIGMNAITYYGPEIFKMMGFGQNAGFVTTCIVGVVEVIFTVIAVLLIDKVGRKKL-------MSIGSAFMAIFMILIGTSFYFELTSG--IMMIVLILGFVAAFCVSVGPITWIMISEIFPNHLRARAAGIATIFLWGANWAIGQ-FVPMMID-SFGLAYTFWIFAVINILCFLFVVTICPETKNKSLEEI-EKLW 462          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.716e-23
Identity = 65/226 (28.76%), Postives = 119/226 (52.65%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++R+++E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L +     M    T++ + L +K      D + G + + +  I  F++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+G+++    F FF +PET+    E++T
Sbjct:  245 ESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLK------DNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDIT 462          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.716e-23
Identity = 65/226 (28.76%), Postives = 119/226 (52.65%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++R+++E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L +     M    T++ + L +K      D + G + + +  I  F++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+G+++    F FF +PET+    E++T
Sbjct:  245 ESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLK------DNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDIT 462          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
PLT3_ARATH1.152e-2333.50Probable polyol transporter 3 OS=Arabidopsis thali... [more]
GTR3_CANFA1.504e-2329.65Solute carrier family 2, facilitated glucose trans... [more]
HXT7_YEAST1.965e-2329.46High-affinity hexose transporter HXT6 OS=Saccharom... [more]
HXT6_YEAST1.965e-2329.46High-affinity hexose transporter HXT6 OS=Saccharom... [more]
HXT3_YEAST1.965e-2329.17Low-affinity glucose transporter HXT3 OS=Saccharom... [more]
HXT10_YEAST1.965e-2328.31Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
GTR14_HUMAN2.566e-2329.07Solute carrier family 2, facilitated glucose trans... [more]
ARAE_BACSU2.566e-2332.72Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
GTR3_PONAB5.716e-2328.76Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN5.716e-2328.76Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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