DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.839e-22
Identity = 65/229 (28.38%), Postives = 115/229 (50.22%), Query Frame = 1
Query:    7 ASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLV-SIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK----VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            A  + K    PF +L + + R +  +   L ++Q  +GINAI +Y+P +F+++G  G+     +T I G V ++ T++  ++ VD VGRR +L        L    I   + I      K     L +G  +  +     + + +  SW    W+I SE F   TRS GQ+     N  + F+I++    M    ++G++ FF+  +L+   F++F +PETK++P+E M
Sbjct:  263 AREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIGAYIKIAGPGTTKTEEAKLTSG-GIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISRFTPQMFIKMEYGVYFFFASLMLLSVVFIYFFIPETKSIPLEAM 490          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HGT1_KLULA (High-affinity glucose transporter OS=Kluyveromyces lactis GN=HGT1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.839e-22
Identity = 68/258 (26.36%), Postives = 128/258 (49.61%), Query Frame = 1
Query:   40 FRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILG---------------IKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK---PPWLWKNFMVDHGFDDDEPKKK 759
            +++L +++  P+ ++ V+ Q++QQ  G+N +M+Y   +F   G+ G+ +L ++ I   +NV+ T+ +++ +DK GRR +L+  GI MF     +A IL                + ++  SE  +T  A  V+     F+  FA +WG   W+  SE F    R+ G +++   N  F F +A    S   +  +  ++ F  + + ++   FF+ PETK   +EE+ +++W    P W   N++       DE   K
Sbjct:  266 YKDLFRKKTLPKTIVGVSAQMWQQLCGMNVMMYYIVYIFNMAGYTGNTNLVASSIQYVLNVVMTIPALFLIDKFGRRPVLIIGGIFMFTWLFSVAGILATYSVPAPGGVNGDDTVTIQIPSE--NTSAANGVIASSYLFVCFFAPTWGIGIWIYCSEIFNNMERAKGSALSAATNWAFNFALAMFVPSAFKNISWKTYIIFGVFSVALTIQTFFMFPETKGKTLEEI-DQMWVDNIPAWRTANYIPQLPIVKDEEGNK 520          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.839e-22
Identity = 61/213 (28.64%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   40 FRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            F +L +RR    L++ + L + QQ  GIN ++FY+  +F++ G   S +  +T   GA+ V++T +S + VDK GRR+LL  + + M +S  ++A    +K       D+++  ++L V+ +   +  F+   GP+ WLI SE  P+  +    S+    N  F+++I      +L     G F  +         FV   +PETK   +EE+
Sbjct:  272 FVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNA--ATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMTANLLLAWSSGGTFTLYGLVCAFTVVFVTLWVPETKGKTLEEL 482          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 8.254e-22
Identity = 64/208 (30.77%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   76 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAI---ILGIKVKDH----SEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            L+I   LQ  QQ TG N++M+++  +F+T+GF  S+++  ++I    N + TL++ + +DK+GRR +LL     M ++  + AI    LGIK        + D  + + +++++ I  + + +A   G + W   SE FP   R  G S     N   + VIA  FL+ML +    G F FF+G   + + F +F  PE   + +EE+
Sbjct:  361 LIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAV--SIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPWQ-QSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSFFAGVACLSTIFCYFCYPELSGLELEEV 565          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 8.254e-22
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1
Query:   88 VALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTV----CVNLL--FTFVIAQAFLSMLCHFKFGI-FLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            V++  FQQ  GINA+++YAP +F+ LGFG   +L  T+  G VN + T+++   VD+ GR+ LL+   + M     V+      KV            VL +  +  +I+ F  SWGP+ W++ SE FP   + A   + V      N+L  F F +A    ++   F  G  +L F+   ++    V   +PETK   ++E+ E +W+
Sbjct:  273 VSVAAFQQLVGINAVLYYAPQMFQNLGFGADTALLQTISIGVVNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCFWFKVG----------GVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILVNFLFKVADGSPALNQTFNHGFSYLVFAALSILGGLIVARFVPETKGRSLDEI-EEMWR 470          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 65/213 (30.52%), Postives = 109/213 (51.17%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGF-GGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTG--FAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGI-FLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            R   +    LQ FQQ TGIN +M+Y+P + +  GF     +L+ ++I  A+N   T+V IY +D  GR+ L L +   + +S     +IL +     SE    G  +  L V+ +  +I  FA   GP+ W + SE +P + R     ++  VN +   ++AQ FL++      G+ FL  +G  ++   FV   +PET+ +   E+ E++WK
Sbjct:  273 RLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIIS----LLILSVSFFKQSETSSDGGLYGWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVNWISNLIVAQTFLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEV-EQIWK 480          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 66/211 (31.28%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSAS-LYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            R  + + V LQ+ QQ TG+N IM+YAP +F+  G+  +   ++ TVI G  NVL+T ++I  VD+ GR+  L    + M     V+  ++ I +   S      FA+ +++M   FI  FA S GPL W++ SE  PL+ R  G + +   N +   ++   FL+ML        F  ++   ++      +L+PETK+V +E +   + K
Sbjct:  249 RRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQY---FAIAMLLM---FIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERNLMK 453          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 66/211 (31.28%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSAS-LYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            R  + + V LQ+ QQ TG+N IM+YAP +F+  G+  +   ++ TVI G  NVL+T ++I  VD+ GR+  L    + M     V+  ++ I +   S      FA+ +++M   FI  FA S GPL W++ SE  PL+ R  G + +   N +   ++   FL+ML        F  ++   ++      +L+PETK+V +E +   + K
Sbjct:  249 RRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQY---FAIAMLLM---FIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERNLMK 453          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: RAG1_KLULA (Low-affinity glucose transporter OS=Kluyveromyces lactis GN=RAG1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.408e-21
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 1
Query:   79 VIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV----KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKN 714
            ++ + +Q  QQ TG N   +Y   +F+++G   S    ++++ G VN  ST  ++Y+VD  GRR  LL   + M     V A +   ++     DH +    G    +++  C +I  FA +W P+ +++ SE++PL  +    ++    N ++ F+I     F++   HF +G    F G ++    +V+F +PETK + +EE+ E   +    WK+
Sbjct:  324 LMGIMIQSLQQLTGDNYFFYYGTTIFQSVGMDDSFE--TSIVLGIVNFASTFFALYTVDHFGRRNCLLYGCVGMVACYVVYASVGVTRLWPDGPDHPDISSKGAGNCMIVFACFYIFCFATTWAPIAYVVISESYPLRVKGKAMAIASASNWIWGFLIGFFTPFITSAIHFYYG--YVFMGCMVFAFFYVYFFVPETKGLTLEEVNEMYSEGVLPWKS 537          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.408e-21
Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVI-TGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  L+ A+ +  FQ  +GI A++ Y P +FK  G      L+   I  G +       +   +DKVGRR LLL +   M ++ T++    G+ +  ++        VL ++   +F++ F+   GP+ W+  SE FPL+ R+ G S+ V VN +    ++ +FLS+       G F  F+G   +   F FFLLPETK   +EE+
Sbjct:  273 RRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGF--GLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEI 475          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
QAY_NEUAF4.839e-2228.38Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
HGT1_KLULA4.839e-2226.36High-affinity glucose transporter OS=Kluyveromyces... [more]
ERDL6_ARATH4.839e-2228.64Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ITR2_YEAST8.254e-2230.77Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
GLF_ZYMMO8.254e-2230.62Glucose facilitated diffusion protein OS=Zymomonas... [more]
INT1_ARATH1.078e-2130.52Probable inositol transporter 1 OS=Arabidopsis tha... [more]
GALP_ECOLI1.078e-2131.28Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL61.078e-2131.28Galactose-proton symporter OS=Escherichia coli O6 ... [more]
RAG1_KLULA1.408e-2127.06Low-affinity glucose transporter OS=Kluyveromyces ... [more]
PLT6_ARATH1.408e-2131.22Probable polyol transporter 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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